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Information for unigene UN06412

FASTA Sequence
Unigene ID: UN06412Length: 1344 SSR 
GGATCAGATCAGAAGATTTGGGGGAGTTTAGGTTTCTCGTCGAAGCTTCTGGAAGGATTGAGAGAGAGAGAGATCTCAGAGGAAAA
TGGCAGCTACAAGGGAGAAACAGAACAACAACAGCTCAAAGCCTCCTCCTACTCCTTCTCCTCTCCGCAGTTCCAAGTTCTGTCAG
CCTAACGTGAGGATCTTGATCTCGGGAGGAGCTGGCTTCATTGGCTCTCACTTGGTTGATAAGCTCATGGAAAATGAGAAGAACGA
GGTGATTGTTGCTGATAACTACTTCACTGGATCAAAAGAAAACCTCAAGAAGTGGATCGGTCACCCAAGATTTGAGCTCATTCGTC
ACGATGTTACCGAGCCTTTGTTGATCGAAGTTGATCGGATCTATCATCTTGCTTGTCCTGCCTCTCCTATCTTCTACAAGTACAAC
CCCGTTAAGACCATCAAGACCAATGTGATTGGTACACTCAACATGCTCGGTCTTGCCAAGCGTGTTGGAGCTAGAATCCTGCTCAC
CTCGACCTCGGAGGTCTACGGAGATCCTCTCATCCACCCTCAACCAGAGAGCTACTGGGGAAACGTCAACCCTATCGGTGTCCGGA
GTTGCTACGACGAAGGCAAGCGTGTAGCTGAGACGTTGATGTTTGACTACCACAGACAACATGGCATTGAAATCCGCATTGCTAGG
ATCTTCAACACGTACGGTCCTAGGATGAACATAGATGATGGGCGTGTGGTGAGCAACTTCATTGCTCAAGCACTCAGAGGTGAGGC
TTTGACAGTTCAGAAACCGGGGACGCAGACTCGTAGTTTCTGCTATGTATCAGACATGGTGGATGGACTTATCCGTCTCATGGAAG
GAGATGATACTGGTCCTATCAACATCGGTAACCCAGGTGAGTTCACAATGGTGGAACTGGCTGAGACAGTTAAGGAGCTGATTAAC
CCGAGCATAGAGATAAAGATGGTGGAGAACACACCAGACGATCCAAGACAGAGGAAACCAGACATAAGCAAGGCTAAAGAAGTGTT
GGGTTGGGAGCCAAAGGTGAAGCTTAGAGAAGGACTTCCTTTCATGGAAGAAGACTTCCGGCTAAGGCTTAACGTCCCCAAAAACT
AAAGAAATGTGAAGGCACAGGAGAAAACGTTTTTTGAGTTTTAAGAGTATATGGAGTTTTAAGAGAAAACGTTTTTTGAGTGATGG
TTTGGTTTCATACTTTCATGTATTGTTATCGATCTTTCCTTCTATTCATAGAAAAATAAGTTGGGAAATTTTTTTTTTCTTTTCTT
AATGAGGATCGACTCTTTTTGTTTGAATATATTGTGGTATTGTTATCGTGTCAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_001078768 UDP-glucuronic acid decarboxylase 3 [Arabidopsis thaliana]17505e-193
XP_002866324 UDP-glucuronic acid decarboxylase [Arabidopsis lyrata subsp. lyrata]17452e-192
NP_200737 UDP-glucuronic acid decarboxylase 3 [Arabidopsis thaliana]17415e-192
AAK53026 AT5g59290/mnc17_180 [Arabidopsis thaliana]17343e-191
XP_002877483 UDP-xyl synthase 5 [Arabidopsis lyrata subsp. lyrata]17083e-188

Swiss-Prot top hits (Blast detail)Scoree value
Q8NBZ7 UDP-glucuronic acid decarboxylase 110522e-113
Q91XL3 UDP-glucuronic acid decarboxylase 110522e-113
Q5R885 UDP-glucuronic acid decarboxylase 110522e-113
Q5PQX0 UDP-glucuronic acid decarboxylase 110522e-113
Q6DF08 UDP-glucuronic acid decarboxylase 110404e-112

TrEMBL top hits (Blast detail)Scoree value
Q9FIE8 DTDP-glucose 4-6-dehydratase-like protein17413e-192
Q94JQ5 AT5g59290/mnc17_18017342e-191
Q9SN95 AT3G46440 protein16993e-187
Q9ZV36 Putative nucleotide-sugar dehydratase16544e-182
B9SZF3 Dtdp-glucose 4-6-dehydratase, putative16482e-181

Arabidopsis top hits (Blast detail)Scoree value
AT5G59290.2 UXS3 (UDP-GLUCURONIC ACID DECARBOXYLASE 3); UDP-glucuronate decarboxylase/ catalytic17511e-195
AT5G59290.1 UXS3 (UDP-GLUCURONIC ACID DECARBOXYLASE 3); UDP-glucuronate decarboxylase/ catalytic17421e-194
AT3G46440.1 UXS5; UDP-glucuronate decarboxylase/ catalytic17001e-189
AT3G46440.2 UXS5; UDP-glucuronate decarboxylase/ catalytic17001e-189
AT2G28760.2 NAD-dependent epimerase/dehydratase family protein16552e-184

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  33%
 
72  67%

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