Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN06414

FASTA Sequence
Unigene ID: UN06414Length: 1106 SSR 
GAACAACAACGTGTGGGTGACGAAGAGCACACGGAAAGGGAAGAAGAAGAGCAAAGCCAACAACAACAACAACAACAACACCACGC
CGAGCTCAGCAGCCGTGGACGACAAGGTGCTCATCACTCCAGTTCCCAGGTTCCCGGACAAGGGAGACGACACGCCCGACTCCATC
ATCCGCCTCTCGAAAGTCTACAAGGCAGAGAAAGTCGAAGTGAGCGAGGACAGACTCACGGCGGGGAGTAGTAAAGGTTATAGGAT
GGTGAGAGCTACGAGAGGTGTTGTGGAAGGAGCTTGGTACTTTGAGGTTAAAGTTGTGAGCTTGGGGGAGACGGGGCACACGAGGC
TTGGTTGGTCGACTGAGAAAGGGGATTTACAGGCTCCGGTTGGGTATGATGGGAATAGTTTTGGGTTTAGGGATGTTGATGGGTGT
AAGGTGCATAAGGCTGTGAGAGGGGAGTATGCTGAGGAAGGGTATAAGGAAGGTGATGTTATTGGGTTTTATATTAACTTGCCTGA
TGGGGAAAGTTTTGCTCCTAAGCCGCCTCGTTATGTGTGGTATAAAGGGCAGAGATATGTGTGTGCGCCTGATACTAAAGAGGAGC
CTCCTAAAGTCGTACCAGGTAGTGAAATATCGTTCTTCAAAAATGGTGTATGTCAGGGAGTTGCTTTCAAAGATCTTTTTGGCGGT
CGTTACTTCCCTGCTGCTTCCATGTACACTCTCCCTGACCAGCCAAACTGTGTTGTCAAGTTCAATTTTGGCCCTGATTTCGAGTT
TTACCCTGAGGATTTTGGTGGGCGTGCAACCCCGAGGCCCATGTTGGAGGTTCCGTATCATGGATTCAATGGTAAACCTGAAAATG
ATGGTTCTGATGATATGAAGAGTTAGGTAGAACAAGCAGGCGTTATCTTAACATTTTTAACACAGTTTTTTATATCTAGTCATTGG
TTCAGATACGATTTTATGAGTAGAAAATGAGCGAATGTGTTTGTACATGTCTGCTCCAATACGCTGGAAACTAGCATTTTTTTTTC
TTACTTTCAGAACTTGATGTAGTTCTTTCTGGATTAGCCATATTCGTCAAAAGTTATTGATTGTTCATTTGTAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002891640 SPla/RYanodine receptor domain-containing protein [Arabidopsis lyrata subsp. lyrata]14001e-152
NP_175556 TRAUCO protein [Arabidopsis thaliana]13849e-151
XP_002282630 PREDICTED: hypothetical protein [Vitis vinifera]12055e-130
XP_002313348 predicted protein [Populus trichocarpa]11903e-128
XP_002299899 predicted protein [Populus trichocarpa]11894e-128

Swiss-Prot top hits (Blast detail)Scoree value
Q9UBL3 Set1/Ash2 histone methyltransferase complex subunit ASH23047e-027
Q91X20 Set1/Ash2 histone methyltransferase complex subunit ASH23021e-026
O60070 Set1 complex component ash22034e-015
Q9PTY5 Ran-binding protein 91372e-007
Q28FM1 Ran-binding protein 91372e-007

TrEMBL top hits (Blast detail)Scoree value
Q9C8J7 At1g5145013846e-151
B9HNY7 Predicted protein11902e-128
B9GEU8 Predicted protein11893e-128
B9RIE8 Putative uncharacterized protein11883e-128
B8BM07 Putative uncharacterized protein9098e-096

Arabidopsis top hits (Blast detail)Scoree value
AT1G51450.1 SPla/RYanodine receptor (SPRY) domain-containing protein13853e-153

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  33%
 
82  67%

Unigene MembersMember information