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Information for unigene UN06416

FASTA Sequence
Unigene ID: UN06416Length: 1586 SSR 
GGACCTCCCTCTCTCTCTTATACTATCTCCTCGTGCTAATCTCTCTCTCTCCATCGAACCTGTTAAAACCAACCATGGCGACGAGC
TCCGGCCGGTTAATCGCCGGTTCGACGGTGTCGATGAGCTCAATCAAACGGCGCAATGCGAATCCACCTCAATCAATCTCCCTAAT
CTGTCGAAATCAAATACAAGGCGTACCGCCTCTCGTCCTACGGTCATCATCATCTCAAAGGTCCACCAGGCTGTGGTCAGTCGAGG
CGGTTCCTTCGGCGAAGTTCTGGGACGGATCTGACGATTTCGAAGTCGCCAAGGAGGAGGAGAAGAAGAAGTCAGACGTTCCCGCG
GCCGGTGGAAAAACCGATGTTCCCGCGGTCGTCGGAAATCGCGATATAGTTATAGCGGCGGCGCTGACGGCGGCGCTGGGGGTGGG
GAACCGCGTAATGTATAAGCTGGCACTTATTCCTCTCAAGCACTATCCCTTCTTCCTCGCTCAGCTTTCCACTTTCGGGTATGTAG
CTGTGTACTTTTCTATCCTGTATTTCAGATACCGAGCTGGGATTGTTACAAAAGAGATGCTATCAGTTCCAAAGATTCCATTTTTA
ATTGTTGGTATTTTGGAGTCTCTTGCTTTAACTTCTGGGATGGCTGCTGCAGCAAATCTCTCTGGACCATCTACCACAGTTTTATC
TCAGACGTTTCTTATTTGGCAAATTCTATTCTCCATGATTTTTCTCGGGAGGAGATATAGAATAAACCAAATATTCGGATGTATTC
TTGTAGCATTTGGTGTAATCGTCAGTGTGGCAAGTGGATCGGGGGCCGCTAATTCATTTAAAGATGCTGGAATATTTTGGAGTCTT
CTTATGGTATTATCTTTTATGCTTCAAGGAGCAGATACAGTAATGAAGGAAATCATCTTTCTAGATAGCAAAAAGCGGTTGAAGGG
TGCTTCACTTGATCTCTTTGTTGTAAACTCATATGGTTCAATGTTCCAAGTCATATGCATTGCGTTGCTTCTTCCTTTTCTTTCAA
AACTTTGGGGCATACCGTTTAACCAACTACCAAGCTATCTCAGAGACGGAGGTGCTTGCTTTCTGAACATTGGTGCTAAAACAACA
GGATGCGAAGGGGCTCCCCTTCTTCCTATAATGTTTGTCATGATGAATATGGCTTACAACATTTCTCTTCTACGCCTCATCAAGAT
CTCATCTGCTGTTGTGTCGTCTCTGGCATCCACCGTTTCAGTGCCCATAGCGGTTTACTTCTTCACGCTTCCCTTACCGTACCTTG
GGGTCGCATCTTCACTTCCAACAGGGTTCGTGGCAGGCACAGTGATCCTTGTACTTGGCATGCTTCTATATGCTTGGACACCATCA
TCTCAAACTCCTGATTCGGTTATCCCCTCGCCCACATCAACTTAAATGGGCAGAGGAGGTTGATTTTGTAGCTTTGTTTGTTTGTT
TGTTATTATTTTCTATTTTATCTCATTGTATGTAGCATGTCCTTTTTGTCAATCAAGTAATAAGTTAGCTCATTATTTTGTAACAT
TTATCTTGACTGTTTTTTTTGGTTTACATTTGATTCGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568373 CRT (chloroquine-resistance transporter)-like transporter 1 [Arabidopsis thaliana]18106e-200
AAM62809 unknown [Arabidopsis thaliana]18081e-199
XP_002873945 predicted protein [Arabidopsis lyrata subsp. lyrata]15866e-174
NP_001078575 CRT (chloroquine-resistance transporter)-like transporter 3 [Arabidopsis thaliana]14925e-163
AAM60923 unknown [Arabidopsis thaliana]14782e-161

Swiss-Prot top hits (Blast detail)Scoree value
Q9GSB0 Crt homolog 12162e-016
Q55C66 Crt homolog 32053e-015

TrEMBL top hits (Blast detail)Scoree value
Q058P6 At5g1938018104e-200
Q8LE71 Putative uncharacterized protein18087e-200
Q8RWL5 MRNA, , clone: RAFL24-19-J2214923e-163
Q8LGC9 Putative uncharacterized protein14781e-161
B9HNH2 Predicted protein12584e-136

Arabidopsis top hits (Blast detail)Scoree value
AT5G19380.1 unknown protein18112e-202
AT5G12170.2 unknown protein14931e-165
AT5G19380.2 unknown protein13991e-154
AT4G24460.1 unknown protein10064e-109

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  50%
 
61  25%
 
91  25%

Unigene MembersMember information