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Information for unigene UN06456
| FASTA Sequence |
| Unigene ID: UN06456 | Length: 1034 |
SSR | | GGACACTGAACACACACACACACACACGCGATCTACCTTCAATCATCGTCGTCACTGTGACTACTAAAGCGTTTGTTTCTCGTGAT
CATCGTTGAGAAAGATGGCTAGAAAATTCTTCGTCGGAGGCAACTGGAAATGCAACGGAACTGGTGAGGAGGTGAAGAAGATTGTG
AGCACTCTTAACGAAGCTCAAGTACCTTCACAGGATGTCGTTGAGGTTCTGGTTAGCCCTCCATATGTGTTTCTTCCTCTGGTTAA
GAGCACATTGAGGTCTGACTTCCATGTTGCTGCACAAAATTGCTGGGTGAAGAAAGGAGGTGCCTTCACTGGTGAAGTGAGTGCGG
AGATGCTTGTGAACTTGGACATCCCATGGGTTATCCTTGGTCACTCTGAAAGGAGGGCACTCCTCAATGAATCAAACGAGTTTGTC
GGAGACAAGGTGGCCTATGCACTTGCTCAAGGTTTGAAAGTGATTGCATGTGTTGGTGAGACTCTTGAACAGCGAGAGGCTGGGTC
TACCATGGATGTTGTGGCTGCCCAGACTAAAGCTATTGCTGATCGCGTGTCCAACTGGTCAAGTGTTGTCATAGCCTATGAGCCAG
TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCTCAAGCTCAGAAGTACATGATGAGCTGAGGAAATGGCTTGCAAAGAACG
TGAGTGATGATGTTGCTGCTACAACCCGCATCATTTATGGAGGATCCGTGAATGGTGGTAACTGCAAGGAGCTAGGTGGTCAGGCC
GATGTGGATGGTTTCTTGGTTGGTGGTGCTTCCCTAAAGCCTGAGTTTATCGATATCATTAAGGCTGCGGAGGTGAAGAAAAGCGC
TTAATGAGTTCACTAAGCAATCTCGAAACCTTTTGTTTATCCAGTTTAAACTTTGATAGAAAAATGAATAAGTTGGTGCAAGTATT
ATGTGTTACTCTTTGCTTGCTTCGTTGTATGTTGTCAACTGACAATCTCTTCCTTTTAATCTTCCCTAGTGGAGTTGTTTTCGGTC
TT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002876302 predicted protein [Arabidopsis lyrata subsp. lyrata] | 909 | 1e-095 |
| NP_191104 triosephosphate isomerase [Arabidopsis thaliana] | 901 | 9e-095 |
| AAA03449 cytosolic triose phosphate isomerase [Arabidopsis thaliana] | 901 | 9e-095 |
| AEK69741 (S)-tetrahydroprotoberberine oxidase [Corydalis saxicola] | 878 | 4e-092 |
| XP_002311168 predicted protein [Populus trichocarpa] | 868 | 6e-091 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P48491 Triosephosphate isomerase, cytosolic | 901 | 4e-096 |
| P48495 Triosephosphate isomerase, cytosolic | 857 | 5e-091 |
| P21820 Triosephosphate isomerase, cytosolic | 850 | 3e-090 |
| P12863 Triosephosphate isomerase, cytosolic | 837 | 1e-088 |
| P48494 Triosephosphate isomerase, cytosolic | 796 | 6e-084 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9PE68 Triosephosphate isomerase | 868 | 4e-091 |
| A9P7V6 Triosephosphate isomerase | 866 | 7e-091 |
| B9HTI4 Triosephosphate isomerase | 866 | 7e-091 |
| A5BV65 Triosephosphate isomerase | 855 | 1e-089 |
| Q38JI4 Triosephosphate isomerase | 851 | 4e-089 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G55440.1 TPI (TRIOSEPHOSPHATE ISOMERASE); triose-phosphate isomerase | 901 | 3e-097 |
| AT2G21170.1 TIM (TRIOSEPHOSPHATE ISOMERASE); catalytic/ triose-phosphate isomerase | 586 | 1e-060 |
| AT2G21170.2 TIM (TRIOSEPHOSPHATE ISOMERASE); catalytic/ triose-phosphate isomerase | 529 | 5e-054 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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