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Information for unigene UN06490

FASTA Sequence
Unigene ID: UN06490Length: 586  SNP
GGGCCGCTCTTTCATTTTCTCCGTGGCGGCCTGAGCTTTGCGAAAATGGTTCAACGGCTTGTTTACCGATCACGCCACTCTTACGC
CACCAAATCAAACCAACACCGCATCGTCAAAACTCCTGGTGGGAAGTTGACTTTCCAGACGACGAAGAAGAGAGCTAGTGGACCTA
AGTGCCCTGTCACTGGCAAGCGAATCCAAGGGATTCCTCATCTGAGACCTGCTGAGTACAAGAGGTCGAGGTTGTCGAGGAACAGG
AGAACAGTGAACCGTGCATATGGTGGTGTTCTCTCTGGGCTAGCTGTTAAAGACAGGATCGTTAGGGCGTTCTTGGTTGAAGAGCA
GAAGATTGTGAAGAAGGTTTTGAAGCTTCAGAAGTTTAAGGAGAAGACTGCACCAAAGAGTTAGATAACTTCTTTTGTGGAGAGTT
TTGCAGTAAAGTGATGTGTGAGAGGAATATGTCTTTGTAAGGGAGATCGTTAGACATGAGTGAGTTTGATTCACCAGATTTTGTTA
TTTTGACTTCAGTTGAGATATTACTTTTCATGACTTTGGTTTACCAATTACCATTATAATTCGTCCCGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002887248 hypothetical protein ARALYDRAFT_894747 [Arabidopsis lyrata subsp. lyrata]5752e-057
NP_189532 60S ribosomal protein L34-3 [Arabidopsis thaliana]5742e-057
NP_177120 60S ribosomal protein L34-2 [Arabidopsis thaliana]5707e-057
NP_174010 60S ribosomal protein L34-1 [Arabidopsis thaliana]5671e-056
AAM66030 60s ribosomal protein L34 [Arabidopsis thaliana]5643e-056

Swiss-Prot top hits (Blast detail)Scoree value
Q9LJW6 60S ribosomal protein L34-35741e-058
Q9FE65 60S ribosomal protein L34-25703e-058
Q42351 60S ribosomal protein L34-15678e-058
P41098 60S ribosomal protein L345444e-055
P40590 60S ribosomal protein L345435e-055

TrEMBL top hits (Blast detail)Scoree value
A9PDF8 Predicted protein5534e-055
A9PB27 Putative uncharacterized protein5526e-055
A9P8R1 Predicted protein5491e-054
B9S8W0 60S ribosomal protein L34, putative5463e-054
C6SWN5 Putative uncharacterized protein5463e-054

Arabidopsis top hits (Blast detail)Scoree value
AT3G28900.1 60S ribosomal protein L34 (RPL34C)5759e-060
AT1G69620.1 RPL34 (RIBOSOMAL PROTEIN L34); structural constituent of ribosome5703e-059
AT1G26880.1 60S ribosomal protein L34 (RPL34A)5686e-059
AT1G26880.2 60S ribosomal protein L34 (RPL34A)4468e-045

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
84  33%
 
121  8%
 
103  25%
 
64  33%

Unigene MembersMember information