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Information for unigene UN06501
| FASTA Sequence |
| Unigene ID: UN06501 | Length: 1090 |
SSR | | GGAAAACAGAACACACTTGTTGGAATTGAGATCGATTTTTGGGCTCAGACTCTGTCTGTCAAACTTGATTGCCGCGAAGATTTACA
CAATTTCCATAGCATCGAATCTTAAAAAGAGCGAAAGTTTCTCTCTTTGGAGTGAGATTTGGAGGGTGAGATCGAGCTCTGGAAGT
GAGGAAATCTTAAGAAGGAAAGATGGGTAGAGAGATGTCGTTTTTGTTACAGCCCAGGAGAAGCAAGTGATCCAGGATTATGAAAT
CACACACAGAGTGTTTCTCGATGTTGATATCGACGGCCAACGCTTAGGCAGGATCGTTATTGGATTATATGGCACTGTTGTACCCA
AAACTGTTGAAAACTTCAGGGCATTATGCACAGGAGAGAAGGGGAAAACTTCAAGCGGGAAGCCTCTACACTATAAAGGAACACCA
TTTCATAGAATAATATCTGGATTCGTAATCCAAGGAGGAGACATCATCCATGGTGATGGCAAAGGGAGTGACTCAATCTATGGTGG
TACCTTTCCTGACGAAAATTTCAAGATTAAGCATTCACATGCAGGTGTTGTAGCGATGGCTAATACAGGACCTGATTCTAATGGCT
CACAGTTCTTTATCACTACTGTCAAGGCTAGCTGGTTGGAAGGGGAGCATGTTGTGTTTGGGAAGGTGATACAAGGAATGGACAAT
GTGTTCGCCATTGAAGGTGGAGCCGGTACTTACAGTGGCAAACCAAGGAAGAAAGTTGTGATTGCTGATTCTGGAGAGATCCCTAA
AGACAAATGGGATGAAGAGAGATGACAAAACGTAAAATCTTACACATCGCAGCAAATCTTGGTCCTTTTCCTATGAGATCCTCTCT
CTCTCTCTCTTTTTTTATTTATAGTTTTGCAGATGTGATGATCTGAATTCTGAATACAATGCCAATGTAGTTAGTGTTTTTAAAGC
TGGACGCATCCTGTACCTCTTTACTTCAGTTTTCTTTTCTTCTCATGAATTTTACTTTATTTATATGATTTTCTTAGTTCAGTTTA
CATTTAGGTAACTATACGATATGTTTATGTCGTTTCAAAATATAAGATGTTTTGAGCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002869115 hypothetical protein ARALYDRAFT_491161 [Arabidopsis lyrata subsp. lyrata] | 974 | 3e-103 |
| NP_195222 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana] | 970 | 9e-103 |
| BAF81521 putative peptidyl-prolyl cis-trans isomerase [Brassica rapa] | 927 | 9e-098 |
| XP_002533862 peptidyl-prolyl cis-trans isomerase, putative [Ricinus communis] | 871 | 3e-091 |
| XP_002313720 predicted protein [Populus trichocarpa] | 869 | 5e-091 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8LDP4 Peptidyl-prolyl cis-trans isomerase CYP19-4 | 634 | 4e-065 |
| Q9SP02 Peptidyl-prolyl cis-trans isomerase CYP20-1 | 607 | 5e-062 |
| Q9TW32 Peptidyl-prolyl cis-trans isomerase B | 577 | 2e-058 |
| P52015 Peptidyl-prolyl cis-trans isomerase 7 | 548 | 3e-055 |
| P52011 Peptidyl-prolyl cis-trans isomerase 3 | 539 | 4e-054 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O49605 Peptidyl-prolyl cis-trans isomerase | 970 | 6e-103 |
| A8CF54 Peptidyl-prolyl cis-trans isomerase | 927 | 6e-098 |
| B9T6J3 Peptidyl-prolyl cis-trans isomerase | 871 | 2e-091 |
| B9HR79 Predicted protein | 869 | 3e-091 |
| C6TGD4 Peptidyl-prolyl cis-trans isomerase | 847 | 1e-088 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT4G34960.1 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative | 971 | 3e-105 |
| AT2G29960.1 CYP5 (CYCLOPHILIN 5); peptidyl-prolyl cis-trans isomerase | 634 | 3e-066 |
| AT5G58710.1 ROC7; peptidyl-prolyl cis-trans isomerase | 607 | 4e-063 |
| AT3G55920.1 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative | 578 | 1e-059 |
| AT4G38740.1 ROC1 (ROTAMASE CYP 1); peptidyl-prolyl cis-trans isomerase | 522 | 3e-053 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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