Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN06509

FASTA Sequence
Unigene ID: UN06509Length: 1047 SSR 
CTAAATCCATCTCTCTCTCTCTCTTCTTCTTAGAAGTTTCATTTTCATGTATTACTAGTTCAGCTCCTGTTTCGGTTTACATGTAT
ATGACTTTGTATCTCTTTCCTTTTTCTCTCCTTCTTCAAATTTTTAATCTTTTTCCCCTTGATTAATTAAATTGAGCTCTTGTGTG
TCCATCCTCAAGCTAAGATACTGGTTTTAACTTGAGGGAAAGAGAAGGAGATTACTTAATCAGGGTGTTAAACTGTTTGCTTTTCT
TTGCTTTTCATTCAAGAAATGGATCAGGTCTCACGCTCTCTTCCTCCACCTTTCCTCTCAAGAGATCTCCATCTTCACCCACACCA
TCAGTTTCAGCATCAGCAGCAACATAACCACGGCCACGATATAGACCAACACAGGATCGGTGGACTAAAACGCGACCGAGACACTG
AGATCGATCCAAACGAGCACTCTTCAGCTGGAAAAGATCAAAACACTCCCGGTTCCGGCGGAGAAAGCGGCGGCGGCGGAGGAGGA
GATAATCACATCACGAGAAGGCCACGTGGCAGACCAGCGGGGTCCAAGAACAAACCAAAACCACCGGTCATCATCACGAGAGACAG
CGCAAACGCTCTCAAGTCCCATGTGATGGAAGTAGCTAACGGATGTGACGTCATGGAAAGCGTCACCGTCTTTGCTCGCCGTCGCC
AACGTGGTATCTGCGTTCTTAGTGGTAACGGCGCCGTCACGAACGTTACCATAAGACAGCCAGCTTCGGTTCCTGGTGGTGGCTCG
TCCGTCGTTAACTTACACGGACGTTTCGAGATTCTTTCTCTCTCGGGATCTTTCCTCCCTCCTCCTGCTCCACCTGCTGCTTCCGG
TCTAACGATTTACCTAGCCGGTGGTCAAGGACAGGTCGTTGGAGGGAGCGTGGTGGGTCCACTCATGGCTTCAGGACCTGTGGTGA
TCATGGCTGCTTCGTTTGGGAACGCTGCGTATGAGAGGTTGCCTTTAGAGGAAGATGATCAGGACGAGCAGCAAACGGCTTGAGCG
GTTGCTAATAACATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002880179 hypothetical protein ARALYDRAFT_903987 [Arabidopsis lyrata subsp. lyrata]12942e-140
NP_182067 AT-hook motif nuclear-localized protein 22 [Arabidopsis thaliana]12881e-139
XP_002511734 ESC, putative [Ricinus communis]8472e-088
XP_002279636 PREDICTED: hypothetical protein [Vitis vinifera]8202e-085
XP_002281296 PREDICTED: hypothetical protein [Vitis vinifera]7988e-083

Swiss-Prot top hits (Blast detail)Scoree value
Q9S7C9 Putative DNA-binding protein ESCAROLA6229e-064

TrEMBL top hits (Blast detail)Scoree value
O22130 AT-hook motif nuclear localized protein 2212888e-140
B9RDE5 ESC, putative8471e-088
A5BIN6 Putative uncharacterized protein8201e-085
B9GVU3 Predicted protein7871e-081
B9GKT4 Predicted protein7842e-081

Arabidopsis top hits (Blast detail)Scoree value
AT2G45430.1 DNA-binding protein-related12885e-142
AT4G22810.1 DNA-binding protein-related7714e-082
AT4G12050.1 DNA-binding protein-related7429e-079
AT3G60870.1 DNA-binding protein-related6981e-073
AT4G17800.1 DNA-binding protein-related6739e-071

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
201  50%
 
61  50%

Unigene MembersMember information