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Information for unigene UN06517

FASTA Sequence
Unigene ID: UN06517Length: 1340 SSR 
GGCCTCTAATTCATCCCCCTTTCTTTCTTCAAACCTACTTTCTCCCAGTTTCGTATCTGATCCGTTAATCGAAGATAGATCCGGCA
GTTTTGAGCTGAATTCGAAAGAAAGAAACAGAGTAATAATGGCGAACAGAGATGTGGAGAGAGAAGGGAAGCAGAACAGCATCAAC
AACAACAACAACAACAACTATTTCTATGACGAAAGCTCCATCGATACTCACTGGACTTCGTGGCTCGTTCCACTGATCGTTGTGGC
GAATCTCGCCGTCTTTGTCGCCGTTATGTTCGTTAACGACTGTCCCAAGAAGATCAACGGACCAAACAAAGCTTGCGTCACTAGAT
TCCTCGGAAGATTCTCGTTTCAGCCACTTAGAGAGAATCCTCTCTTTGGCCCTTCTTCTTCTACATTGGAGAAAATGGGAGCATTG
GAGTGGAGGAAAGTAGTACATGAGCATCAAGGGTGGAGACTCGTCACTTGTATGTGGCTACACGCTGGTATCATTCATCTTCTCGC
CAATATGTTGAGTTTGATCTTCATCGGTATCCGCCTTGAGCAGCAGTTTGGCTTCATAAGAGTCGGGCTTATCTACTTAATCTCTG
GTCTCGGTGGAAGCATACTCTCGTCTCTTTTCCTCCAAGAAAGTATCTCTGTTGGTGCTTCCGGTGCTCTCTTTGGACTTCTTGGA
GCAATGCTATCCGAGCTTCTCACTAATTGGACTATCTATGCCAACAAGGCGGCTGCTCTGTTCACACTCCTATTCATCATAGCAAT
CAACTTAGGACTAGGCTTGCTTCCTCGCGTTGACAATTTTGCACATATCGGCGGGTTTATAACCGGGTTCTGCCTCGGTTTTATCC
TCCTTATCCGGCCACAGCACGGTTGGGAAAGTTCCCGCACCAACACTACTTCCCTTACCAAACGCAAGTATAGCATCTACCAGTAC
GTTCTGTTCTTCGTTGCGGCCCTTATACTTGTGGTTTGTTTAGCCGTTGGATCAGTGATGCTTTTCAAAGGAGAGAATGGTAACAA
ACATTGCAAATGGTGTCATCGCCTCAGCTGTTTCCCTACTTCTAAATGGACCTGTTAATCATCGTCATCACCATCATCATCATTAT
CCTCTAAAACTATTATATGTGTTCTTGTAACAGATAATTTGTTTGTTCTTTTTGCCTTTGTCCTCTCTTATACCTTTTATAACATA
CATGTACATTACTAAATTTGTCGTGTAAAAAAGGGGAAAGAAACAAAAGAGTGTATTACATTTAAAAATTAGAAGTACATAAAACA
GTATTGTTGGATTGAAGGTACTTAATCTCATTATAGTACTTCATTTATAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_176500 rhomboid -like 2 [Arabidopsis thaliana]14549e-159
XP_002886431 hypothetical protein ARALYDRAFT_893154 [Arabidopsis lyrata subsp. lyrata]14503e-158
XP_002283259 PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]11951e-128
XP_002304474 predicted protein [Populus trichocarpa]11887e-128
XP_002298056 predicted protein [Populus trichocarpa]11762e-126

Swiss-Prot top hits (Blast detail)Scoree value
Q6GMF8 Rhomboid family member 12716e-023
Q6PIX5 Rhomboid family member 12662e-022
Q499S9 Rhomboid family member 12653e-022
B0VX73 Rhomboid family member 12644e-022
B1MT31 Rhomboid family member 12644e-022

TrEMBL top hits (Blast detail)Scoree value
Q9CAN1 Membrane protein, putative; 61952-6028114546e-159
B9GWE6 Predicted protein11885e-128
B9GKM2 Predicted protein11761e-126
C6TDC6 Putative uncharacterized protein11519e-124
B7FIQ5 Putative uncharacterized protein11302e-121

Arabidopsis top hits (Blast detail)Scoree value
AT1G63120.1 ATRBL2 (Arabidopsis thaliana Rhomboid-like 2); serine-type endopeptidase14642e-162
AT1G12750.1 ATRBL6 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 6)11192e-122
AT1G12750.2 ATRBL6 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 6)11192e-122
AT5G07250.1 ATRBL3 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 3)10602e-115
AT2G29050.1 ATRBL1 (Arabidopsis thaliana Rhomboid-like 1)10091e-109

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  67%
 
61  33%

Unigene MembersMember information