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Information for unigene UN06579

FASTA Sequence
Unigene ID: UN06579Length: 765 SSR 
AGGGGAGAGAAGAAGAAGAAGAAGAAGGAGAGGAAGATGGGGCTACAAGGTCAGCTCAGTGACGTCTCTTCCGATTCGATCCCTCT
GATGCTCCTCTCTCTCCTCGCCGTATTCCTCAGCCGTCTCCGCTCTCTCCTCCACCGCCCCTGCGATTCCAACTCCGACGACTCCT
CCGTCATAGCGTCGGGACTCGCCAACATCATCGTCCTCGCCGATCAGCTGAGCCTGAACCGTCTCTTCTCGTACCGGTTCGGAGGA
GGCGGAGGCGAAGGAGGTTCCGATTGCGTGGTGTGTCTGTCGAAGCTGCAGGAGGGAGAAGAGGTGAGGAAGCTGGAGTGTCGACA
CGTGTTCCACAAGCGGTGCTTGGAGGGATGGCTCCACTGTCTTAATTTCACATGTCCTCTCTGTAGATCTGCTTTGGTCGCCGATG
GTTGCGTCTCCAAAACGCAGCGGCGCGTGGGAAGGGATTTGATCTCCTGCCTCGCTCCCCACTGATTCTCACGCGTGCGATCGGGT
TTAGGAGATTCCCTGGATCGGAATCCAACGGCTGTGATTCACCCATCTTCAACTGTTCTTTTATGTAGAGAGATCGGAAAAATTAT
AGAGGCTGTCTGGTCGATTTGACCACGCGCGCCCTTGTTTTCTTGATCTTTTTTTTTTGAGTTTTTTTTTCTCATGGACTTGTAAT
ATCCGGACATATCTCATAATGTACAGAAGCATGTTTGATGTATCCTTAAATTGTTCAATGATCGATATGCAAAACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_172962 E3 ubiquitin-protein ligase RHA2A [Arabidopsis thaliana]6068e-061
XP_002892849 ring-H2 finger A2A [Arabidopsis lyrata subsp. lyrata]5781e-057
XP_002875062 hypothetical protein ARALYDRAFT_484022 [Arabidopsis lyrata subsp. lyrata]3674e-033
XP_002283507 PREDICTED: hypothetical protein [Vitis vinifera]3495e-031
XP_002312419 predicted protein [Populus trichocarpa]3219e-028

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZT50 E3 ubiquitin-protein ligase RHA2A6064e-062
Q9ZU51 RING-H2 zinc finger protein RHA2b4075e-039
P87237 Uncharacterized RING finger protein C4G3.12c1271e-006
Q9P7E1 Uncharacterized RING finger protein P4H10.071271e-006
Q8VEM1 Goliath homolog1262e-006

TrEMBL top hits (Blast detail)Scoree value
B9HJ71 Predicted protein3216e-028
B9HWB4 Predicted protein3153e-027
Q1H5F4 At2g011502921e-024
B9SJY5 Putative uncharacterized protein2454e-019
B9HFQ5 Predicted protein1828e-012

Arabidopsis top hits (Blast detail)Scoree value
AT1G15100.1 RHA2A; protein binding / ubiquitin-protein ligase/ zinc ion binding6073e-063
AT2G01150.1 RHA2B (RING-H2 FINGER PROTEIN 2B); protein binding / ubiquitin-protein ligase/ zinc ion binding4074e-040
AT2G04240.1 XERICO; protein binding / zinc ion binding1682e-012
AT2G04240.2 XERICO; protein binding / zinc ion binding1682e-012
AT1G24580.1 zinc finger (C3HC4-type RING finger) family protein1379e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  67%
 
71  33%

Unigene MembersMember information