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Information for unigene UN06581
| FASTA Sequence |
| Unigene ID: UN06581 | Length: 843 |
SSR | | GATGCAAATATTACATATATATCCATAAATCAAACATTTGACAATCCGATAAAAAATGTCTCAAACAGAAATCCAAAAAAAAAGAA
ACAAGACTGTAGGATACAAGAAAATGGGAGACCAACATACAACACCATGGGATGATATGATATGATATGATATGATCACCTCAGTG
GAACTTGAGGCTGGTCAAAACATTGTTGTTGACGGGATCCGCCAAATGATCAAGAAGGTTCTGGTAAGGTCCCACACCGGTCACTA
GTCCCTGGATAAAATAGCCAAGGATGACAACAAGATCATTGAGGCTGAGACTGGTTCTGTACATGAAGTCTCATTTGTGGAGCATG
CTATATACCAGGATGAGGATCAGTATAATTTAGAAGAGATGGAATTTATACTAGGGGAGCGCTTGAAAGAACAGCAAGAGATCACT
GAGGAGCTTAATATGCATTTGGATTCTCTCTGCAAAGAGGTGAATGGAATGATAGACATCATCGATACCCGTTTCAAGATGTTGTG
CACCCAAGTTTCTCAGATTGCAAAAATTGTGAAAAATGAAATTTTTCTTCAAAAGAACGACATTATTCACGCCGGTACTATTTACG
CGGGACTGTTCATCCGGTTACTATTCATCCGATTAATGTTCATCCAGGGACTATTCATCGGAGTACTGTTCACGCGGGTACTGTTC
ATTCGAGTACTGTTCATCCTGCATCGATCGACACTGTTCATCCGATATCGATCGACACTGTTCATCCCGTATCGGTCGACACTGTT
CATCACGACACTGTTGATCATGACACTGTTCATCAAAATACTGTTCATCATGACACTATTCATCCCGAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_176347 light-harvesting complex I chlorophyll a/b binding protein 3 [Arabidopsis thaliana] | 204 | 4e-014 |
| NP_001031217 light-harvesting complex I chlorophyll a/b binding protein 3 [Arabidopsis thaliana] | 204 | 4e-014 |
| AAA18206 PSI type III chlorophyll a/b-binding protein [Arabidopsis thaliana] | 204 | 4e-014 |
| AAM63442 PSI type III chlorophyll a/b-binding protein, putative [Arabidopsis thaliana] | 204 | 4e-014 |
| XP_002888084 hypothetical protein ARALYDRAFT_475174 [Arabidopsis lyrata subsp. lyrata] | 204 | 4e-014 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q32904 Chlorophyll a-b binding protein 3, chloroplastic | 201 | 4e-015 |
| P27522 Chlorophyll a-b binding protein 8, chloroplastic | 198 | 9e-015 |
| P12470 Chlorophyll a-b binding protein E, chloroplastic | 121 | 8e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2V2R9 Uncharacterized protein At1g61520.2 | 204 | 3e-014 |
| Q43381 PSI type III chlorophyll a/b-binding protein | 204 | 3e-014 |
| Q8LCR7 PSI type III chlorophyll a/b-binding protein, putative | 204 | 3e-014 |
| Q9SY97 PSI type III chlorophyll a/b-binding protein | 204 | 3e-014 |
| A3F4K0 Chloroplast PSI type III chlorophyll a/b-binding protein (Fragment) | 203 | 4e-014 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G61520.1 LHCA3; chlorophyll binding | 205 | 1e-016 |
| AT1G61520.2 LHCA3; chlorophyll binding | 205 | 1e-016 |
| AT1G29910.1 CAB3 (CHLOROPHYLL A/B BINDING PROTEIN 3); chlorophyll binding | 119 | 1e-006 |
| AT1G29920.1 CAB2 (CHLOROPHYLL A/B-BINDING PROTEIN 2); chlorophyll binding | 119 | 1e-006 |
| AT1G29930.1 CAB1 (CHLOROPHYLL A/B BINDING PROTEIN 1); chlorophyll binding | 119 | 1e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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