|
Information for unigene UN06581
FASTA Sequence |
Unigene ID: UN06581 | Length: 843 |
SSR | | GATGCAAATATTACATATATATCCATAAATCAAACATTTGACAATCCGATAAAAAATGTCTCAAACAGAAATCCAAAAAAAAAGAA
ACAAGACTGTAGGATACAAGAAAATGGGAGACCAACATACAACACCATGGGATGATATGATATGATATGATATGATCACCTCAGTG
GAACTTGAGGCTGGTCAAAACATTGTTGTTGACGGGATCCGCCAAATGATCAAGAAGGTTCTGGTAAGGTCCCACACCGGTCACTA
GTCCCTGGATAAAATAGCCAAGGATGACAACAAGATCATTGAGGCTGAGACTGGTTCTGTACATGAAGTCTCATTTGTGGAGCATG
CTATATACCAGGATGAGGATCAGTATAATTTAGAAGAGATGGAATTTATACTAGGGGAGCGCTTGAAAGAACAGCAAGAGATCACT
GAGGAGCTTAATATGCATTTGGATTCTCTCTGCAAAGAGGTGAATGGAATGATAGACATCATCGATACCCGTTTCAAGATGTTGTG
CACCCAAGTTTCTCAGATTGCAAAAATTGTGAAAAATGAAATTTTTCTTCAAAAGAACGACATTATTCACGCCGGTACTATTTACG
CGGGACTGTTCATCCGGTTACTATTCATCCGATTAATGTTCATCCAGGGACTATTCATCGGAGTACTGTTCACGCGGGTACTGTTC
ATTCGAGTACTGTTCATCCTGCATCGATCGACACTGTTCATCCGATATCGATCGACACTGTTCATCCCGTATCGGTCGACACTGTT
CATCACGACACTGTTGATCATGACACTGTTCATCAAAATACTGTTCATCATGACACTATTCATCCCGAC
|
|
|
GenBank top hits (Blast detail) | Score | e value |
NP_176347 light-harvesting complex I chlorophyll a/b binding protein 3 [Arabidopsis thaliana] | 204 | 4e-014 |
NP_001031217 light-harvesting complex I chlorophyll a/b binding protein 3 [Arabidopsis thaliana] | 204 | 4e-014 |
AAA18206 PSI type III chlorophyll a/b-binding protein [Arabidopsis thaliana] | 204 | 4e-014 |
AAM63442 PSI type III chlorophyll a/b-binding protein, putative [Arabidopsis thaliana] | 204 | 4e-014 |
XP_002888084 hypothetical protein ARALYDRAFT_475174 [Arabidopsis lyrata subsp. lyrata] | 204 | 4e-014 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q32904 Chlorophyll a-b binding protein 3, chloroplastic | 201 | 4e-015 |
P27522 Chlorophyll a-b binding protein 8, chloroplastic | 198 | 9e-015 |
P12470 Chlorophyll a-b binding protein E, chloroplastic | 121 | 8e-006 |
TrEMBL top hits (Blast detail) | Score | e value |
Q2V2R9 Uncharacterized protein At1g61520.2 | 204 | 3e-014 |
Q43381 PSI type III chlorophyll a/b-binding protein | 204 | 3e-014 |
Q8LCR7 PSI type III chlorophyll a/b-binding protein, putative | 204 | 3e-014 |
Q9SY97 PSI type III chlorophyll a/b-binding protein | 204 | 3e-014 |
A3F4K0 Chloroplast PSI type III chlorophyll a/b-binding protein (Fragment) | 203 | 4e-014 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT1G61520.1 LHCA3; chlorophyll binding | 205 | 1e-016 |
AT1G61520.2 LHCA3; chlorophyll binding | 205 | 1e-016 |
AT1G29910.1 CAB3 (CHLOROPHYLL A/B BINDING PROTEIN 3); chlorophyll binding | 119 | 1e-006 |
AT1G29920.1 CAB2 (CHLOROPHYLL A/B-BINDING PROTEIN 2); chlorophyll binding | 119 | 1e-006 |
AT1G29930.1 CAB1 (CHLOROPHYLL A/B BINDING PROTEIN 1); chlorophyll binding | 119 | 1e-006 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|