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Information for unigene UN06595
| FASTA Sequence |
| Unigene ID: UN06595 | Length: 801 |
SSR | | GGTAAAGGAATACTTAAGGCATTGATAGTTTATGTTTCATTGCAACATGAAAGAGGTAACATCCCAAAGCAAACAACACAAAAAGA
AACAAAACTTGGAAGGAAATCAAATATCTTTTTGGCAAGGAGAGATCTAAAAGTCTCTAGATCTTGTTGAATGCGACGATGTCAAC
ACTCTGGATGTACTCGTTGTTAGGTTCAGAGGTGAGATAGTCTTCAATGAGGTTGTCTGGGGAGACGAGGTCATCAACGATTGTGA
GCATGATCGTGAGCTTCTTGATCCCGTAACCAACTGGAACCAGTTTTGAAGCTCCCCATAGAAGACCAGGCATCTCAACAGCACGA
ACACACTCCTCGAGTTTCTTCATATCTGTCTCGTCATCCCATGGTTTCACTTCCATGAGCACAGAGGACTTTCCACTCTCTTTGGG
CTTCTTGGTGTCCTTCTTAGCAGCCTCCCTCTCCTCTGCAGCTTTCTTTTCCTCCTCAGTCTCGTCACCAAACAGATCCATGTCAT
CATCATCATCAGCTGCAGCTACTGCATGTGCCTCGGCTTGAGCAGGAGCAGCAACAGAGCCACCGATTGAAACTCCTACGGCTTTA
CCAGGGAGACTTTTAGGGAAACTCTCGCTTGGTTTCTCAACAACGGCAGCGTATACCTTCACATCATCTACAGACAATTGATCTCC
GGAGATGTAGGTTTTTCCGACGAGGTGCTCCTCAACGGATTTGATACCCTGCTCTGTGTGTAGATCTGAAAAGGTAACCGCCATTG
TAGCTAGCTGCTGCTTTAGTGAGTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002873951 elongation factor 1B alpha-subunit 2 [Arabidopsis lyrata subsp. lyrata] | 710 | 8e-073 |
| NP_568375 Elongation factor 1-beta 2 [Arabidopsis thaliana] | 704 | 4e-072 |
| NP_196772 Elongation factor 1-beta 1 [Arabidopsis thaliana] | 659 | 6e-067 |
| AAO22799 putative elongation factor 1B alpha-subunit [Arabidopsis thaliana] | 659 | 6e-067 |
| XP_002871512 hypothetical protein ARALYDRAFT_909184 [Arabidopsis lyrata subsp. lyrata] | 629 | 2e-063 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SCX3 Elongation factor 1-beta 2 | 704 | 2e-073 |
| Q84WM9 Elongation factor 1-beta 1 | 659 | 3e-068 |
| P29545 Elongation factor 1-beta | 560 | 9e-057 |
| P93447 Elongation factor 1-delta | 548 | 2e-055 |
| Q40680 Elongation factor 1-delta 1 | 532 | 2e-053 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q29PY2 At5g12110 | 659 | 4e-067 |
| A9P7W8 Predicted protein | 598 | 5e-060 |
| Q1XG58 Putative elongation factor | 587 | 1e-058 |
| B9GEM9 Predicted protein | 574 | 3e-057 |
| B6SIK8 Elongation factor 1-beta | 570 | 9e-057 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G19510.1 elongation factor 1B alpha-subunit 2 (eEF1Balpha2) | 705 | 1e-074 |
| AT5G12110.1 elongation factor 1B alpha-subunit 1 (eEF1Balpha1) | 660 | 2e-069 |
| AT2G18110.1 elongation factor 1-beta, putative / EF-1-beta, putative | 520 | 4e-053 |
| AT1G30230.1 elongation factor 1-beta / EF-1-beta | 511 | 4e-052 |
| AT1G30230.2 elongation factor 1-beta / EF-1-beta | 510 | 5e-052 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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