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Information for unigene UN06627

FASTA Sequence
Unigene ID: UN06627Length: 859 SSR 
GGGAAACCCTCCGAAACTACACAACACACTCTCTTCTCTCTCTCCGCCTCCATTATCTTCGAAAGACCAAATCTGATCCTCTCTCT
CTCTTCTTCTACCCGTTTCCTCCATTAACACACAGAGAGCTCCAACAAGCTTCCTCCTTTACCTAAAGAGGAGAGAGAGAGAGAGT
TTCCAGATCGGATCTGATTTTGAAAGATGCAGACGGCAAACAACGGTCCAGATTCGTCGTCGGCTACACCAGCCGGGACAACGCCA
CCTCCTCCCTCGCAACAACAACAACAACAGTGGCAACAACATCAACAATGGATGGCGGCTATGGCTATGATGCAGCAGCAGCAACA
GATGATGATGTATCCTCCTCACCACCAGTACGCTCCTTACAACCAAGCTGCTGCTTATCCTCAGTTTCAATACGCTCCTCCTTATC
ACCAGCAACAACAACAGAAGCAGCGTGGTGGATCTGGTGCTGGTGGAGACGATGTGAAGACTCTCTGGATCGGTGATCTTCTCCAT
TGGATGGACGAGACTTATCTCCACACCTGTTTCTCTCACACCAACCAGGTTTCCTCTGTGAAAGTGATACGAAACAAGCAAACTTG
TCAGTCAGAAGGGTACGGTTTTGTCGAGTTCCTCTCACGTTCCGCAGCTGAGGAAGTTCTTCAGAGCTATAGCGGCGTTACAATGC
CTAACGCCGAGCAGCCCTTCCGTTTGAACTGGGCATCTTTCAGTACCGGCGAGAAGAGAGCTCCGAAACACGGTCAGATCTATCTT
TATTCGTAGAGATTGGCTCCTGATGTGACGATACTCTGCTGATGAGACTTTGCTGCGTACAATCTGTCAAAGTGCAAAGTTGTGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002894197 hypothetical protein ARALYDRAFT_474095 [Arabidopsis lyrata subsp. lyrata]7001e-071
NP_175383 RNA-binding protein 47A [Arabidopsis thaliana]6803e-069
AAG13046 Putative RNA binding protein [Arabidopsis thaliana]6803e-069
BAB02953 DNA/RNA binding protein-like [Arabidopsis thaliana]6508e-066
NP_188544 RNA-binding protein 47B [Arabidopsis thaliana]6508e-066

Swiss-Prot top hits (Blast detail)Scoree value
O60176 Uncharacterized RNA-binding protein C23E6.01c1478e-009
P34314 Serine/threonine-protein kinase tousled-like 11226e-006
O77033 General transcriptional corepressor trfA1218e-006

TrEMBL top hits (Blast detail)Scoree value
Q9FX88 Putative RNA binding protein6802e-069
Q0WW84 At3g191306506e-066
Q9LJL7 DNA/RNA binding protein-like6506e-066
Q8LFI9 Nuclear acid binding protein, putative5583e-055
B9HRX8 Predicted protein5332e-052

Arabidopsis top hits (Blast detail)Scoree value
AT1G49600.1 ATRBP47A (Arabidopsis thaliana RNA-binding protein 47a); RNA binding7598e-081
AT3G19130.1 ATRBP47B (RNA-binding protein 47B); RNA binding6503e-068
AT1G47490.2 ATRBP47C (ARABIDOPSIS THALIANA RNA-BINDING PROTEIN 47C); RNA binding3781e-036
AT1G47490.1 ATRBP47C (ARABIDOPSIS THALIANA RNA-BINDING PROTEIN 47C); RNA binding3781e-036
AT1G47500.1 ATRBP47C' (RNA-binding protein 47C'); RNA binding3547e-034

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information