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Information for unigene UN06748
| FASTA Sequence |
| Unigene ID: UN06748 | Length: 1880 |
SSR | | TTAGCTCCGCGACTGATGATAGCCGAGACATGTCGTTTCAGGATCCGGAGAGAGTTAAGGTTAGGCAGTATGGGAAGGCGTGTAAA
GAGCTCACGGGGGTTTTCAAGAGCAAAGAGATTGATGCTCATAAAGGGTCGATTTGGTGCATTAGGTTCAGTTTGGATGGGAGGTT
TCTTGCTAGTGCTGGCGAGGATTGTGTGATTCAGATTTGGGAGGTTGTTGAATCGGAAAGGAAAGGGGAACTTTTGTTGATGGATA
AACAAGACGATGGAGGCGTGAATTTGTCGGTATTGGCGAATGGATCTCCGGAGCCAGCTTCAGTGTCTCAAATGAGGAGAGGGAGA
ACATCTTTTAGCAGAAAATCAGTGAGTCTTGACAATGTCCTGGTTCCAGAAACAGTCTTTGGGCTTTCAGAGATACCCGTGTGCTC
GTTTGTAGGGCATTCGGATGATGTGCTTGACCTTTCGTGGTCGAAATCTCAGCACCTGCTTTCCTCTTCTATGGACAAGACAGTTC
GCCTATGGGATTTGTCTAGCAAGACATGTTTGAAAGTCTTCTCGCATAGTGACTACGTGACGTGCATCCAGTTTAATCCCGTAGAC
GAAAATTATTTCATCAGTGGGTCATTGGATGAAAAAGTCCGAATATGGAGCATTCCTGATCATCAAGTTGTTGATTGGAAGGATCT
TCATGAGATGGTCACAGCTGCCTGCTATACACCGGATGGTCAGGGTGCATTGGTTGGTTCATACAAGGGGACTTGTTGCTTATACA
ACACAAGTGATAACAGACTGCAGCAGAGAAAGGAAATCAATCTGAAGAACAAGAAAAAGAAATCCAATCACAAGAAAATCACTGGT
TTTCAGTTTGTGGCGGGAAGTTCATCGGAAGTGCTGGTCACATCTGCAGATTCACGTGCGCGTGTGGTTGACGGTGTTGACCTTGT
TCACAAGTTTAAAGGATTCCGCAACGCCAACAGTCAAATCTCGGCCTCACTTACATCAAACGGAAAATTCTTAGTCTCAGCGAGCG
AAGACTCCAATGTCTATGTATGGAACTACGAGTCAGAGACTCGAGCTGGTAGAAGCAAACGTGTAACAGTCACAAACTCATACGAA
CACTTTTACTGTCGAGACGTCTCTGTGGCTGCACCTTGGCCTGGCAAAATCAGTAACAACAACAACAACAACAGCCCCGACCAATC
GCCTTTCACAGCCAATAACCCTCCAACACCTGCCAACGATCCAATCAACAACACAGCCGTCACCAACGGTATCATTTCGAGCGCCA
CAAACGGCTACTTCTTCGATAGAATGTCAGCGACTTGGCCCGATGAGAAGCTTTTGCTTGCTGCAAAGAACCGAGCACGAACTAGC
CCTAGTGTGAGCGTGGACTTGTTTAATGGACCGGTTAACACAAAACCGAACGCTTCGGCTTGGTTTATGGTGGTCGTGACCGGCGG
TTTACGAGGTGAGATTAGAACTTTTCAGAATTTTGGATTACCGGTTCGTCTTTGAAGATGATATTTTTTACTTGGGTAAAAAACCA
TCTTTATTCAAAAGTGTGTATAGATCGAGAGAAGGTTAGTTCTTCCACTTACCTCTTTTTTTCCTTTTACCACGCCTCTTTTATTT
ATTTTTTTCCTTAATATTTGTTCTCTCTGAAATTCAAATCTTTAGGAAATACATATATATAATTATTTTTAATGTGAAAAATCAGA
TAGCTGAAAAAAGAAAATTCATGTACTGCAGTGTTTTATGTATTAAAGTTGAACTTTGTGTAGAGTTTGTCTTTGCAGTATTTTGT
ATACACATTCTGTATTTTTACATTTGACATTTCTATACATGTAAAAATCAATTGAATAGAGGTTTTTGTTTATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_200231 transducin/WD40 domain-containing protein [Arabidopsis thaliana] | 2338 | 5e-261 |
| XP_002866029 WD-40 repeat family protein [Arabidopsis lyrata subsp. lyrata] | 2327 | 9e-260 |
| XP_002329147 predicted protein [Populus trichocarpa] | 1790 | 2e-197 |
| XP_002534244 WD-repeat protein, putative [Ricinus communis] | 1790 | 2e-197 |
| XP_002282052 PREDICTED: hypothetical protein [Vitis vinifera] | 1605 | 5e-176 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9XSC3 WD repeat-containing protein 44 | 486 | 1e-047 |
| Q5JSH3 WD repeat-containing protein 44 | 485 | 1e-047 |
| Q6NVE8 WD repeat-containing protein 44 | 485 | 1e-047 |
| Q9R037 WD repeat-containing protein 44 | 485 | 1e-047 |
| Q498F0 WD repeat-containing protein 44 | 485 | 1e-047 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FK21 Similarity to WD-containing protein | 2338 | 3e-261 |
| B9N1K2 Predicted protein | 1790 | 1e-197 |
| B9T7M5 WD-repeat protein, putative | 1790 | 1e-197 |
| B9HZX5 Predicted protein | 1632 | 2e-179 |
| Q9LDG7 AT3g15470/MJK13_13 | 1498 | 8e-164 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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