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Information for unigene UN06776
| FASTA Sequence |
| Unigene ID: UN06776 | Length: 950 |
SSR | | GGAAAATTTGCTTGGTTTATATGAAAATACATTTAAATGAAACCCCTCGATAATATCTAATAGCCACCTTTCATGGCACTTCTTGC
GTTGTCGTGTTGATCCAAAGAATGAATCATTTTTATAACAGGAGGTTGTAGTACGGCAGATGAGATTATAGTCAAATTATTGGGGT
CGAGGGACAGTCCCAACCAGAATTAGAGGAGATTAAAGTTGCCGCTTCCTTTGATTTCATTCTCCGGAGGAATCAATCACTCTTTT
TCTCCGAAAACAAAAGAAAAATGCAGAGGAATGGGATGAGAAGAGCCCATTCTTTATGGTGCAAGAGTTTAACAAACAACTTGCAT
CATCATCATCATCCGTCTATTCCAGTCACCACCACCACCATGTCTAGTTTGGAGGAGCTGAGCTCCATAGACAGGATCCAGAGGAG
GGTAACAGATTGCAATGATGGTAAAAGCTTCTGTATGCATTCTCGGAAAGTATCTCAACGACAACTTTTACTTGGGAACTCATCAG
TTTCTGGCACTCTATGGGAATCCAAACATTTTCACACCTTACCACATTCACTTAACAAGCACCAGCTCCTTAGAGAAGTACCCAAG
TTTGTGAAGATTGTAGAAGTTGGTCCAAGGGATGGCCTTCAGAACGAGAAAAACATTGTTCCCACTTCTGTTAAGGTCGAACTCAT
TCGGAGATTGGTTTCTGCTGGTTTGCCCGTTGTCGAAGCTACTAGCTTTGTCTCTCCTAAATGGGTTCCCCAGCTTGCAGATGCAA
AGAATGTAATGGATGCAGTTAATACTCTACATGGGGCGGCTCGATTGCCTGTTCTTACTCCCAATCTTAAAGGTTTGAAGCAGCTG
TCTCTGCAGTGCTAAGAAGTTGCAATCTTTGCATCGGCTTCCGAGTCATCTCTTTGTCAAATATAACTGTTCCATTGAAGAGTCTC
TCTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002880836 hypothetical protein ARALYDRAFT_481553 [Arabidopsis lyrata subsp. lyrata] | 431 | 2e-040 |
| NP_850088 Hydroxymethylglutaryl-CoA lyase [Arabidopsis thaliana] | 425 | 1e-039 |
| NP_565629 Hydroxymethylglutaryl-CoA lyase [Arabidopsis thaliana] | 425 | 1e-039 |
| NP_850087 Hydroxymethylglutaryl-CoA lyase [Arabidopsis thaliana] | 425 | 1e-039 |
| CAN74167 hypothetical protein VITISV_010123 [Vitis vinifera] | 404 | 3e-037 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O81027 Hydroxymethylglutaryl-CoA lyase, mitochondrial | 425 | 5e-041 |
| Q29448 Hydroxymethylglutaryl-CoA lyase, mitochondrial | 306 | 3e-027 |
| P97519 Hydroxymethylglutaryl-CoA lyase, mitochondrial | 304 | 6e-027 |
| P35915 Hydroxymethylglutaryl-CoA lyase | 302 | 1e-026 |
| P38060 Hydroxymethylglutaryl-CoA lyase, mitochondrial | 293 | 1e-025 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q3EBT5 Putative uncharacterized protein At2g26800.3 | 425 | 8e-040 |
| A5B4X9 Putative uncharacterized protein | 404 | 2e-037 |
| B9HNI0 Predicted protein | 397 | 1e-036 |
| B9RU86 Hydroxymethylglutaryl-CoA lyase, putative | 391 | 7e-036 |
| B6U7B9 Hydroxymethylglutaryl-CoA lyase | 382 | 8e-035 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G26800.1 hydroxymethylglutaryl-CoA lyase, putative / 3-hydroxy-3-methylglutarate-CoA lyase, putative / HMG-CoA lyase, putative | 425 | 5e-042 |
| AT2G26800.3 hydroxymethylglutaryl-CoA lyase, putative / 3-hydroxy-3-methylglutarate-CoA lyase, putative / HMG-CoA lyase, putative | 425 | 5e-042 |
| AT2G26800.2 hydroxymethylglutaryl-CoA lyase, putative / 3-hydroxy-3-methylglutarate-CoA lyase, putative / HMG-CoA lyase, putative | 425 | 5e-042 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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