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Information for unigene UN06797

FASTA Sequence
Unigene ID: UN06797Length: 1027 SSR 
TGCGAGACTGAAGAGCCAAAAGGAGACGACTTTCACATCTCTCTTGCATCCAATGGCAATCGCGTCGTGCTTCTTCTGTGTTCCCA
CTCCGAACACATCATCATCCATCTCTGAATCGAACCTCTCACGTCCTCACCTCTCCTTCTCTCCTAGACTCTCCTCCTCCTCCGTA
AAGTCCATCTCTTTCCACCGCCGCGTCACTGTTTCCCCTCTTTTCTCCTCCTCAATCGACAACGGCGGCTCTGACAACAACAACAA
CAATAACAACGACGGAGGAGACGGAGGGAAGAATAACGGGGATGGAGACGGTGGTGGTGGCGAGGACAGAGACAGGAACAGGAGCG
AGGCGATGATGCTGTTGGCCGAGTCTGGGACGGAGCTGGAGAGCCTTCCCAAGGATCTAGCCGCTGCTATCGAGTCCGGTCGGATT
CCTGGTTCGGTTATCACCCGGTTCCTCGAGCTCCAGAGATCGGCTGTGATGAGGTGGCTGATGCAGTTCGCTGGGTTTAGGGAAAG
GCTCTTGGCTGATGATCTTTTCCTGGCTAAACTCGCCATGGAGTGTGGTGTTGGTATCTTCACTAAGACTGCTGCTGAGTACGAAA
GGCGTAGAGAAAACTTCTTCAATGAACTTGAAGTTGTCTTTGCTGATGTGGTGATGGCTATTATTGCTGACTTCATGTTAGTTTAT
CTTCCTGCTCCTACTGTGTCTCTTAGACCACCTCTCGCACTTTCTGCTGGTGGTATATCCAAGTTTTTCCACAACTGCCCAGACAA
TGCCTTCCAGATTGCTATGTCTGGAACCTCGTATTCTCTCTTGCAAAGGTTTGGTGCTATAGCGCGCAATGGGGCTAAGCTGTTTG
CCGTTGGCACCACATCATCGCTGGTGGGTACTGCTGTTACAAATGCATTTATAAAAGCAAAAGGAGCCGTGGACAAGACTTCTGAT
GGCGAAGTCGAGACTGTTCCAATACTCTCCATAAGTGTTGCATATGGTGTTTACATGGCAGTTTCCAGCAACCTAAGGTAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568280 uncharacterized protein [Arabidopsis thaliana]13462e-146
BAD44296 unknown protein [Arabidopsis thaliana]13462e-146
XP_002873579 hypothetical protein ARALYDRAFT_909228 [Arabidopsis lyrata subsp. lyrata]13158e-143
XP_002513515 conserved hypothetical protein [Ricinus communis]10442e-111
ADN33922 hypothetical protein [Cucumis melo subsp. melo]10334e-110

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q67YD5 Putative uncharacterized protein At5g1247013461e-146
Q94CJ5 At5g1247013461e-146
B9RIE6 Putative uncharacterized protein10442e-111
B9GEZ0 Predicted protein10021e-106
Q5JK51 Os01g0957200 protein9572e-101

Arabidopsis top hits (Blast detail)Scoree value
AT5G12470.1 unknown protein13468e-149
AT2G40400.1 unknown protein3468e-033
AT2G40400.2 unknown protein3468e-033
AT3G56140.1 unknown protein3297e-031
AT3G08630.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: alphavirus core protein family (TAIR:AT3G08640.1); Has 3471 Blast hits to 1913 proteins in 226 species: Archae - 0; Bacteria - 450; Metazoa - 1700; Fungi - 130; Plants - 787; Viruses - 19; Other Eukaryotes - 385 (source: NCBI BLink).2123e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
192  50%
 
201  25%
 
71  25%

Unigene MembersMember information