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Information for unigene UN06852

FASTA Sequence
Unigene ID: UN06852Length: 1342 SSR 
ACAAGCGCAAACCATTTTCAACAAGCACACACCATGTCTCTCCCTATAAGTTTCCAGCATACTCAAGACTGCTATTTCATTCTGTG
CTTGGTGATGATGACTCATTAGAATCAAGAGGCCCTTCCTGGCTTTCATCACGACCTTGTGCATTCACGTATTCATGGACCATCGG
TGCCAGAAGGATACCGACAGAATTGAGATTAGGCAGAAGCCGACGAAACGATGCACGCACAAACCTGTGGTCAGGAGTGTGTTGTT
GGTTGAATCTCCCCGGAACTTTAGAAGGAGACTCGTAACAGGCTTTGCAAAGGTCATACCCCATTTTCTCCTTGCAGTCTTTGCAT
CTGTATCGCTCCCCTATGATTGAATAAACTCCGCATGAATCACAACCAACTCCGATGTGAACATTACAGGTTGGGTTTGGAAGACT
GTTGTTGCTGTTTTCTTCTGATGAGGAGGATGTGCCGCCCTTTCCTCTGCTATTGTGGGTAAGCGTTTTCTGAATCAAAGTTCTCC
TTGAACTGTATTCTTCAGGAAAGCTTTCCTCCAAAAGCTGCTCAAGAGCCAAACAAACTTTGGGGAATCTTCTTGGGTCACAAACA
TGGCACTCTTTACATATGATCTTTTCGCTTTCTTGAGCCATCATATCTACTACACAACCTTCGCAATACACATGTCCGCAGTTGAG
AACCACGGGTCGCACGAGCAGCTCCTTACATGCTGAACAGAGCAAATCATCTTTTGAAACGCCATTCTTAAGTAAGTCATTCTCAT
GAACGTTAACAGTTTTTGCAACTTCAAGGGGTCCTTCTGGATTAGAGCACTCATCAGAGACACTTGGAAACTCAAGCTTAGCCTTT
GGTACATCAATCTGAGGAGAGAAACAAGCTCGTGCTTGTTCATCCTTTAGAAGTTGTGCTTCTCTCTTGTTATGCGCAATCGGGTA
TAACTTCTTTAGCAGAACATGAAGCTTTTGGCAGATAGTGGGGAAGTGAAGATAAGGGTCTCTACAGATGGGACAATGGGACACAC
GGAAGCCACTCATGGACTTATGTACGCACCAGAAACACGATATATGACCACATGATAGCACAATTGGTTTGTAAAGAAGTTCCAGA
CAGACGCAGCAGAGAAACTTATCGGAGATTTCTTCTTCTTCTTCCTGTGGTTCATCATCTTTTATCATCGTCATATAATCCATTGG
TAGAGAGACGAAGTGGGAGATAGATAGAGAGATCTGAGAAGTTGACGGTGCGATGTCTTTGCTTTTTCGAGAGAAGCAATCAAACC
GCCGTAGCTCCTAAAGAGACTAGTTTTTGCCTTCCTTATACACTTAGGATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_189124 E3 ubiquitin-protein ligase PRT1 [Arabidopsis thaliana]8383e-087
AAM64697 PRT1 [Arabidopsis thaliana]8356e-087
XP_002883562 hypothetical protein ARALYDRAFT_479998 [Arabidopsis lyrata subsp. lyrata]8042e-083
BAJ99683 predicted protein [Hordeum vulgare subsp. vulgare]7747e-080
EEC73618 hypothetical protein OsI_08115 [Oryza sativa Indica Group]5085e-049

Swiss-Prot top hits (Blast detail)Scoree value
Q8LBL5 E3 ubiquitin-protein ligase PRT18381e-088
Q9NZS9 Bifunctional apoptosis regulator1336e-007

TrEMBL top hits (Blast detail)Scoree value
B8AFI4 Putative uncharacterized protein5083e-049
Q6K9N9 Os02g0621500 protein5057e-049
B9GQH3 Predicted protein (Fragment)4644e-044
B9S532 Putative uncharacterized protein4573e-043
B9H0A3 Predicted protein4332e-040

Arabidopsis top hits (Blast detail)Scoree value
AT3G24800.1 PRT1 (PROTEOLYSIS 1); ubiquitin-protein ligase8381e-089
AT1G74990.1 zinc finger (C3HC4-type RING finger) family protein1282e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information