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Information for unigene UN06936
| FASTA Sequence |
| Unigene ID: UN06936 | Length: 909 |
SSR | | TTCGGCACAGTTTCAGGAATCTCTCTCTCTCTTTCTCTCTTCTTCAATTGACACATAGCAATCATGACTACCGAAGAGAAAGAGAT
CCTCGCCGCCAAATTGGAAGAACAGAAGATTGATCTTGATAAGCCTGAAGTTGAGGACGATGATGACAACGATGAGGATGACTCCG
ACGACGATAAAGATGATGATGATGCCGAGGGGCAAGATGGAGAGGGAGGAGGAAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGC
CGCAAGGCCATGCTCAAGCTCGGTATGAAACCCATCACCGGTGTCAGCCGTGTCACCGTCAAAAAGAGCAAGAATATCATGTTTGT
CATATCAAAACCTGATGTCTTCAAGAGCCCAGCTTCAGACACATACGTAATCTTCGGAGAGGCCAAGATCGAAGACCTGAGCTCTC
AGATGCAGTCGCAAGCTGCGGAGCAGTTCAAGGCTCCGGATCTCAGCAACGTGATCAAGGGTGAATCGTCGTCGTCCAGCGCTGCT
GCAGTGGTGCAGGATGATGATGATGAGGAAGTCGACGAGGAAGGTGTTGAGCCAAAGGATATTGAGTTGGTGATGACGCAAGCAGG
TGTGCCTAGGCCAAGAGCCGTGAAGGCTCTCAAGGCTGCTGATGGAGATATCGTCTCTGCCATCATGGAGCTTACCACCTAAGCCA
AAATCTTTTCCAACTTTAGATGTGGTTTTAACTTGAGTTATATGGTCCCAGAGATTTCAAGTTTTTGTTTCTATCTTGAAGTGATT
TTCAATGTTGTATCAGTATTACAGTTTGGTTTGTTATTCAATTATCAAGCGTCGGTGGAGGGTTTCAGACAACTGTGCAGCTCTAA
CTTCACAAACCATTGACTGAAACTTTTCTCTCGGCAGCAACCTCACATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_187845 Nascent polypeptide-associated complex subunit alpha-like protein 1 [Arabidopsis thaliana] | 880 | 2e-092 |
| NP_196889 Nascent polypeptide-associated complex subunit alpha-like protein 3 [Arabidopsis thaliana] | 871 | 2e-091 |
| XP_002871590 hypothetical protein ARALYDRAFT_909339 [Arabidopsis lyrata subsp. lyrata] | 864 | 1e-090 |
| NP_001136911 hypothetical protein LOC100217069 [Zea mays] | 733 | 2e-075 |
| XP_002445811 hypothetical protein SORBIDRAFT_07g026160 [Sorghum bicolor] | 713 | 4e-073 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
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| Q9LHG9 Nascent polypeptide-associated complex subunit alpha-like protein 1 | 880 | 8e-094 |
| Q6ICZ8 Nascent polypeptide-associated complex subunit alpha-like protein 3 | 871 | 9e-093 |
| Q9M612 Nascent polypeptide-associated complex subunit alpha-like protein | 686 | 3e-071 |
| Q9SZY1 Nascent polypeptide-associated complex subunit alpha-like protein 4 | 631 | 6e-065 |
| Q94JX9 Nascent polypeptide-associated complex subunit alpha-like protein 2 | 626 | 2e-064 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B4FL79 Putative uncharacterized protein | 733 | 1e-075 |
| A9PA21 Putative uncharacterized protein | 725 | 1e-074 |
| A9NLN5 Putative uncharacterized protein | 724 | 2e-074 |
| C6SZW0 Putative uncharacterized protein | 721 | 4e-074 |
| A2PYH3 Alpha chain of nascent polypeptide associated complex | 716 | 1e-073 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT3G12390.1 nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative | 900 | 4e-097 |
| AT5G13850.1 NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3) | 882 | 5e-095 |
| AT4G10480.1 nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative | 632 | 4e-066 |
| AT3G49470.1 NACA2 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2) | 627 | 2e-065 |
| AT4G10480.2 nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative | 627 | 2e-065 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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