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Information for unigene UN06940
| FASTA Sequence |
| Unigene ID: UN06940 | Length: 1292 |
SSR | | GGGTCCAAGTGCTTCTCTGTTCTCTCTGCCCGCACCACACACTTTACTCTCCCCCAACAGTAGATCTCATCTCCCATTTCAAACCC
TAGAAAAATCAATCAAATTCAATCAGCCACAGTTTGCTCCACCAATGGCGAGCTTCATTCCCCCCAAGTCACTCCTCCTTCTACTC
CTCTTGCCTTTACTCTCACTCTTCTCCGCAATATCTGAAGCTAAACCATCCTTTACCTTCACAAGCTTCGGTAAAAATGGAAGCTT
TGCGTCCGACGACATCGCTCTGTACGGCGAAGCAAACCTCCTCAACGGCGGATCTTCGATTTCGATCCAGCTGAATGACTCGGTGA
GTCATAACAGTGGGCGAGTCGTCTACAAGAAGCCCATTGAGTTCGTCGAGACCAAGTCCGAGTATCCCGCCGGATTCTCTACTCTC
ATCGCTTTCTCCGTCAACGGTGGCGGGAGACTCGGGTTCGTCGTGTTTCCTGTTAACGGAACGTTTGAGCAGTCTCTGTTCGAAGT
AAAGTTCGGTGCTTTCGAAAGGAATGTAACTGTGAGTGTAGATGGCACTACGGTTCCCGAGGAGATTCGCAGTTTCACGGTTGCTA
ACTTGGAGGGAGAGGATAATAAGGAGAAGAAGGTGGTGTTGTTGTACGCTTGGGTTAATTACATTTCAAGTGGGAAGTTCTTGGAA
GTCCGTTTAAGCAAATCAGAGAGCTTCGAACATGTTGATCCTTTGATGTTCACTAGGATCGACTTGTCGGGAATGTTGAAAGGTGA
CAATGAGTTCATGGTTGGTGTGAAGGCGTATGGTGGGAACGTGAATCTCCACTCTTGGAGCTTAGAAGCGAGGAGTGTCTCTAAGG
GTGTGCACTCTTATGGGGCGATTATGGTGGAGAAGCTTATAGAGGAAGAGGAGGCGGAGAAGAGGAGGAGGAGGAGAAGAGCGAGG
GCGTGGGAGATTGTGACTTGCTTTGTGATGACCTTTGGGTCTACAGGGCTTGTGTTTTTCGCCATGATGCATATATGGGCAGCTTT
CAAAAGGAACAATCTCGTGATGACGAAGGAGTTTGAGTATGAGAAGATGGAGAAAATGGAAGCTGTGATGGGTAAAGCTGATAGTG
CAAAATGAAAACAAGTGAAGTAATCAAGTGTTGTGATATATCTCTGTGTGTTTGTTTAGGATATGATCTTTTTATGTAATCAAGTA
GATTCTTCACTGGCTAAATATAGCCCCCTTGTTTTTCATTTCATGTGTGGCAAACATTGTTTCTCTATGGCATGTTCAGTTTGTTT
CA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002876239 hypothetical protein ARALYDRAFT_348499 [Arabidopsis lyrata subsp. lyrata] | 995 | 2e-105 |
| NP_190976 Concanavalin A-like lectin family protein [Arabidopsis thaliana] | 932 | 3e-098 |
| XP_002527882 Agglutinin-2 precursor, putative [Ricinus communis] | 159 | 1e-008 |
| XP_002280264 PREDICTED: hypothetical protein [Vitis vinifera] | 155 | 4e-008 |
| NP_001154599 putative lectin [Arabidopsis thaliana] | 153 | 7e-008 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9M395 Putative uncharacterized protein At3g54080 | 932 | 2e-098 |
| Q8LA09 Lectin-like protein | 174 | 2e-010 |
| Q9LFC7 Lectin-like protein | 174 | 2e-010 |
| B9SPG3 Agglutinin-2, putative | 159 | 9e-009 |
| C6T786 Putative uncharacterized protein | 156 | 2e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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