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Information for unigene UN06940
FASTA Sequence |
Unigene ID: UN06940 | Length: 1292 |
SSR | | GGGTCCAAGTGCTTCTCTGTTCTCTCTGCCCGCACCACACACTTTACTCTCCCCCAACAGTAGATCTCATCTCCCATTTCAAACCC
TAGAAAAATCAATCAAATTCAATCAGCCACAGTTTGCTCCACCAATGGCGAGCTTCATTCCCCCCAAGTCACTCCTCCTTCTACTC
CTCTTGCCTTTACTCTCACTCTTCTCCGCAATATCTGAAGCTAAACCATCCTTTACCTTCACAAGCTTCGGTAAAAATGGAAGCTT
TGCGTCCGACGACATCGCTCTGTACGGCGAAGCAAACCTCCTCAACGGCGGATCTTCGATTTCGATCCAGCTGAATGACTCGGTGA
GTCATAACAGTGGGCGAGTCGTCTACAAGAAGCCCATTGAGTTCGTCGAGACCAAGTCCGAGTATCCCGCCGGATTCTCTACTCTC
ATCGCTTTCTCCGTCAACGGTGGCGGGAGACTCGGGTTCGTCGTGTTTCCTGTTAACGGAACGTTTGAGCAGTCTCTGTTCGAAGT
AAAGTTCGGTGCTTTCGAAAGGAATGTAACTGTGAGTGTAGATGGCACTACGGTTCCCGAGGAGATTCGCAGTTTCACGGTTGCTA
ACTTGGAGGGAGAGGATAATAAGGAGAAGAAGGTGGTGTTGTTGTACGCTTGGGTTAATTACATTTCAAGTGGGAAGTTCTTGGAA
GTCCGTTTAAGCAAATCAGAGAGCTTCGAACATGTTGATCCTTTGATGTTCACTAGGATCGACTTGTCGGGAATGTTGAAAGGTGA
CAATGAGTTCATGGTTGGTGTGAAGGCGTATGGTGGGAACGTGAATCTCCACTCTTGGAGCTTAGAAGCGAGGAGTGTCTCTAAGG
GTGTGCACTCTTATGGGGCGATTATGGTGGAGAAGCTTATAGAGGAAGAGGAGGCGGAGAAGAGGAGGAGGAGGAGAAGAGCGAGG
GCGTGGGAGATTGTGACTTGCTTTGTGATGACCTTTGGGTCTACAGGGCTTGTGTTTTTCGCCATGATGCATATATGGGCAGCTTT
CAAAAGGAACAATCTCGTGATGACGAAGGAGTTTGAGTATGAGAAGATGGAGAAAATGGAAGCTGTGATGGGTAAAGCTGATAGTG
CAAAATGAAAACAAGTGAAGTAATCAAGTGTTGTGATATATCTCTGTGTGTTTGTTTAGGATATGATCTTTTTATGTAATCAAGTA
GATTCTTCACTGGCTAAATATAGCCCCCTTGTTTTTCATTTCATGTGTGGCAAACATTGTTTCTCTATGGCATGTTCAGTTTGTTT
CA
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GenBank top hits (Blast detail) | Score | e value |
XP_002876239 hypothetical protein ARALYDRAFT_348499 [Arabidopsis lyrata subsp. lyrata] | 995 | 2e-105 |
NP_190976 Concanavalin A-like lectin family protein [Arabidopsis thaliana] | 932 | 3e-098 |
XP_002527882 Agglutinin-2 precursor, putative [Ricinus communis] | 159 | 1e-008 |
XP_002280264 PREDICTED: hypothetical protein [Vitis vinifera] | 155 | 4e-008 |
NP_001154599 putative lectin [Arabidopsis thaliana] | 153 | 7e-008 |
Swiss-Prot top hits | Score | e value |
No hits found | | |
TrEMBL top hits (Blast detail) | Score | e value |
Q9M395 Putative uncharacterized protein At3g54080 | 932 | 2e-098 |
Q8LA09 Lectin-like protein | 174 | 2e-010 |
Q9LFC7 Lectin-like protein | 174 | 2e-010 |
B9SPG3 Agglutinin-2, putative | 159 | 9e-009 |
C6T786 Putative uncharacterized protein | 156 | 2e-008 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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