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Information for unigene UN06942
| FASTA Sequence |
| Unigene ID: UN06942 | Length: 1344 |
SSR | | CTTATGCTTCTCTTCTCTCTCATGACAAATAAAAGCAATTTCGTCGAATTGAAGAAAAACATATCTTCTTTTTTGTTTGTCTCTCT
GCTCATTTCACACCCAGTTTTAAACGGTAGCTGTTGTCCGATCTCTATCCATCCTCTAGTACTGTGTCTTCTTGTAAAGCGGTCTC
TGTTTTTAGATTCACACCCTCTTTTTTTTTGTTCTTTCTCTTGACTTGTGTAAAACCCTGAGAACAAGAAGTGTATAAACAAAAAT
CTTTTCAAAAAAAAAGTGTATAAACAGAGATAGTTTGTCTATCTATATAATTGAGAAAAAAAAGAGTTTGGCTTTTAATATTGTTT
GTCGGTATGGGGCTTTGCTGGTCTTCTTCATCTAAATCTCCTTCAACAACAACAACAACACCTACCACTACTGGTAATATCAGTTC
AGGTCCGTTTAAGTCAACGACTACAGAAACATCAAGAAGTAACATATCTAGTACTAGTGGATTCTCTGCTGGAAGTGGTGGAGATG
CTTGCCCTGAGGGTCAGATACTTCCCATTCCGAACTTGAGGATATTCAGCCTTGCAGAACTTAGAGCTACAACCAGAAATTTCAAG
TCTGAGAACGTTCTTGGAGAAGGAGGGTTTGGGAAAGTCTTCAAAGGCTGGCTTGAAGAGAAAGGGCCTGGCAGTCACAGCACTGG
AACTGTGATTGCTGTCAAGAAACTTAACTCTGAAAGCTTCCAAGGATTTGAGGAATGGCAATGTGAGGTGAACTTTCTTGGGAGGG
TTTCTCATCCGAACCTGGTGAAGCTGTTGGGATACTGCTTGGAAGGTGACGAGTTGCTTCTGGTGTATGAGTTCATGCAGAAAGGA
AGCTTAGAGAATCATCTCTTCCGAAAGGGTTCTGTTGTTCAGCCGCTCTCATGGGAAATAAGGCTTAGGATTGCAATAGGAGCAGC
TAAAGGCTTAGCGTTTCTGCACGCTTCAGAGAAGCAAGTCATTTATAGAGACTTCAAAGCTTCTAACATTCTACTTGACAGTTCAT
TTAACGCAAAGCTATCAGATTTTGGATTGGCTAAGTTAGGTCCTTCTGCTAGTCAGTCTCACATCACAACACGGGTTATGGGTACA
CACGGTTATGCAGCTCCAGAGTATGTTGCTACAGGTCACTTGTATGTAAAGAGTGATAACTACGGGTTTGGAGTTGTTTTAGCTGA
GATCTTGACTGGTTTACACGCACTTGATCCTACCCGTCCCACCGGTCAACACAATCTAACAGACTGGATCAAGCCTCATCTCTCAG
AAAGAAGAAAACTGAGGAGGATAATGGACCCTCGTCTAGAAGGAAAGTACCCTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_973478 protein kinase domain-containing protein [Arabidopsis thaliana] | 1519 | 3e-166 |
| NP_565408 protein kinase domain-containing protein [Arabidopsis thaliana] | 1507 | 7e-165 |
| AAM61685 putative protein kinase [Arabidopsis thaliana] | 1503 | 2e-164 |
| XP_002886105 hypothetical protein ARALYDRAFT_480605 [Arabidopsis lyrata subsp. lyrata] | 1499 | 6e-164 |
| CBI37741 unnamed protein product [Vitis vinifera] | 1264 | 1e-136 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P27450 Probable serine/threonine-protein kinase Cx32, chloroplastic | 970 | 5e-104 |
| P43293 Probable serine/threonine-protein kinase NAK | 965 | 2e-103 |
| Q06548 Protein kinase APK1A, chloroplastic | 945 | 4e-101 |
| O49840 Protein kinase 2B, chloroplastic | 945 | 4e-101 |
| P46573 Protein kinase APK1B, chloroplastic | 938 | 3e-100 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SII6 At2g17220/T23A1.8 | 1507 | 5e-165 |
| Q8LEZ7 Putative uncharacterized protein | 1503 | 1e-164 |
| B9SMD4 Serine/threonine-protein kinase cx32, putative | 1251 | 2e-135 |
| B9MYZ9 Predicted protein (Fragment) | 1217 | 2e-131 |
| B9HPX8 Predicted protein | 1214 | 4e-131 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G17220.2 protein kinase, putative | 1519 | 1e-168 |
| AT2G17220.1 protein kinase, putative | 1507 | 3e-167 |
| AT4G35600.1 CONNEXIN 32; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | 970 | 5e-105 |
| AT5G02290.1 NAK; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | 965 | 2e-104 |
| AT5G02290.2 NAK; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | 965 | 2e-104 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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