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Information for unigene UN06951

FASTA Sequence
Unigene ID: UN06951Length: 914  SNP
GAAGACCGAGCTCCAAGATCAAGATCAACCGGTTAACGGGTCAAACCTCATCAAGCTCAGGAATAGCCATAGGAAGTGAAATGTCA
GGGGGTGTATCTGACATCTATATCAAAGACTTGCATCTATTCAATTCCAATACCGGAATCAGAATCAAGACTTCTCCTGGACGAGG
CGGGTACGTTAGAAACGTTCACGTGTCTAACGTGAAGTTCCATGACGTGCAGAAAGCTATTAGGTTCACGGGTAAGTACGGTGAGC
ATCCTGATGAAAACTTTGATCCCAAGGCACTTCCGGCTATAGAGAAGATCACGTTTGAGAATGTTAGTGGTGAAGAAATCGGTGTT
GCGGGTCTTCTTGAAGGTATTGAAGGAGACGAGTTTAAGAACATATGTTTCCTTAATGTTACTCTTACGGTGAAGAAGAACTCGAA
GAAGTCTCCATGGAAATGCTCACATGTTAGAGGCTATTCACAGTGGGTTTCGCCGGAGATTACTTGTGATTCTTTTGAAGAGAGTA
TCTTCCCGGAGCATAGCTCTGATTGTTTTGGGTTGTCAGAGAATAATCTGGAGAAATCAAGTGGTTTAAGTAGATCACCATGGTTG
CTTTCTTGGTAAGTTACTGATGTTTGACCTAAGGGGAACACACAGTTTGCTTGAGTGTGAAGAAACCTCTTCAAATTTTCCTTCCA
ATTTTTTTTCTCTGAGGTTTTTGTTTTTCAAAAGTGATGTTTTCTTCTTTCTTCCTTTTTGTTGTAAATTTGTGTGCAGTGAGGAG
AATAATCAGAGTGACTTGAGAGCTTTTTTGTTGTTGTTTTTTTTGTATGGATTTTTAATGCTTTGGTGAGCAGAACAAGTGTAATA
TCTTCACAAAGAGACTTGAGGTTTTTTTTTGTTTTTGTTATCAATTATTTACGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002875985 glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp. lyrata]9724e-103
XP_002876663 glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp. lyrata]9699e-103
NP_567126 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana]9582e-101
CAB71871 putative protein [Arabidopsis thaliana]9582e-101
ABG34278 polygalacturonase [Eucalyptus globulus subsp. globulus]6061e-060

Swiss-Prot top hits (Blast detail)Scoree value
A7PZL3 Probable polygalacturonase3673e-034
P35336 Polygalacturonase1219e-006

TrEMBL top hits (Blast detail)Scoree value
Q9FPJ2 AT3g621109581e-101
Q9M1R3 Putative uncharacterized protein T17J13.709581e-101
Q153G0 Polygalacturonase (Fragment)6068e-061
B9TA63 Polygalacturonase, putative5961e-059
B9GTA2 Predicted protein5914e-059

Arabidopsis top hits (Blast detail)Scoree value
AT3G62110.1 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein9595e-104
AT4G23500.1 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein3889e-038
AT3G48950.1 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein3753e-036
AT4G33440.1 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein3583e-034
AT3G61490.1 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein3556e-034

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  29%
 
62  29%
 
71  14%
 
102  29%

Unigene MembersMember information