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Information for unigene UN07010
| FASTA Sequence |
| Unigene ID: UN07010 | Length: 986 |
SSR | | AGGTATCAAAAATGTCCTTCTTTGTACAGACCATAGGATGTGTACTAAGCATATTTGAGGAAAAGACACGATGAGTTGGGAAAATG
CATGGTTGATTTTGGAAGTGTTCAAGAGCGTACAACAAGCAACTTTGTGCGAGAATAATCATCTCCACACCATTCTCTGGCTCCAG
CACCACCAGGTCTCATCGCCTCCTCCACAGCTTAATAATTATACTATTTACTCTTTTAAGAACCTAAGCTATGAACAGGAAAAAAA
GAGTAGACAAAAACACGAAACAACAACATATTCCATAAGTAGCTGATGTAAATAGTAGTGGCTTTTGTAGCAACAACACTTGGCAA
AAGCCATAGTGAAACAACTAAAAGTCTGACATATAGAAGTTAAAGGAACAAGATAACAGTAACCGACTTTTTATTCTTCCCATTCA
TAGAGAGCGGCAGTGGTGGAAAACATTCAAGAGGGTTTAGGGCAGCAAGAGATAACTTGAGTATCCATAGGCAAGTAGCGAACCAC
TGCCTGATACTGTTTAGTCTGATTACCATCTGCAGTATCATCATTGGCTTCGAATGTGATGTAGTAGGTGACTCCGGCGGATGGGT
GGTAGTTTGCTTTCAAGACCTTGACAAACTCAAGGCTTATACCCTAAACCACGAGCAAAGAGAGAGAGAGATGTTCAATCTGTCAA
AGTCATGTTTTTAGATTGATTACTAACTAACCGTCTCGTATTTGTGGTGCGTGATAGCCAAGTGCGTCAACCTGGTGAGCAGAGCT
AAGTTGGTATCATCAGGGTCAAGAACCAGGTTATCGTCGTTGAGATCCACAGCTCCTGTGTCGAATTTGTGACGGAGTTTCGAGAA
GTCGATATCGAAACCCCCGCTCTTATCCCACTCTTCATTATACATTCGAAGATCCTCTGACAAATCTTTCTCCCAACTGAAATCAT
CGGAACTCTTCGCTGGAATCATTGCTGATAACGAACCCTA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_196125 cystatin/monellin-related protein [Arabidopsis thaliana] | 224 | 3e-016 |
| NP_196123 cystatin/monellin-related protein [Arabidopsis thaliana] | 222 | 4e-016 |
| XP_002873188 hypothetical protein ARALYDRAFT_487296 [Arabidopsis lyrata subsp. lyrata] | 216 | 2e-015 |
| XP_002873189 hypothetical protein ARALYDRAFT_908406 [Arabidopsis lyrata subsp. lyrata] | 201 | 1e-013 |
| XP_002876181 hypothetical protein ARALYDRAFT_906686 [Arabidopsis lyrata subsp. lyrata] | 195 | 6e-013 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FF68 Genomic DNA, chromosome 5, P1 clone:MUG13 | 224 | 2e-016 |
| Q9FF70 Genomic DNA, chromosome 5, P1 clone:MUG13 | 222 | 3e-016 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G05060.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G05040.1); Has 40 Blast hits to 40 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 224 | 1e-018 |
| AT5G05040.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G05060.1); Has 40 Blast hits to 40 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 222 | 2e-018 |
| AT2G37435.1 cysteine-type endopeptidase inhibitor | 118 | 2e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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