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Information for unigene UN07053

FASTA Sequence
Unigene ID: UN07053Length: 1226 SSR 
TACTGTGATCTTAAACATCAAACCGTAATGGACGATTTTTTTTCAATAAATGTTATACAATAATCTATTTTTTTGTAAAAAACAAC
AATCTAATTGTATTGTAAGAAAAATTGCATAGGATTCAACTTGTCAAAGTTATAATCATTTCAAGTTCAACCAAAAACGAAGTGAA
ACCCATATTTTTCTTCCTACTCAAGAAACGTTTAACTTGGTTCCTCCTCTTCATTTTTTTTTGTCTTTTCGTTGGCATTTCTTCTG
ATACTAAACTTAACGATGAAGCTGGTCTCACCACTCGATGATCGCACTTCTTGTAAAACAGAAAACAAATGTGGAAGTCCAATCTG
TAGCATGCAATTATCAAGCTTGGGAAGGCTCGATTTCAGCATTCGAATTGCTATTTTCTTTATCTTCATCATCGTCTTCCCAGTTA
GTTGTCTTATAGTAAAGTGCATATATTATTAATTGTATTATTCCTGATAGACATCCAAGAACATTTGGGATCAAAATATAGAGGTC
AAATTTAAGACATGCATAAGCGAGCCAAATGGTTCCGTTCATGAAGTCGGCTAAAGACACGAAGAACGGCATACACTTCACGCTCT
TTTTCTTTATCACGAGTCTCATGGCGGTTAAAGGAGAAACATACATGATAACATTGAAAATAACGCATAAGATCCCAACAAGCATA
GATCTCTTTTTTGTTGTATGCAAAAAATACAATGTGCAGAAGACCACCGCAGCCATCAATATCACCTCAATCACCATAGCTATTGT
GATCTTTTTGCGGACAGGCGAGGTAGCAAAGGAAGTCCGCAAAAGGCCCACATCATGCAGTTTAAAACTGTAGCTAAGTATGGATC
TGGCTTAAACTCTGACACCGATTTCATCTTCCATATCTTCACCATCGTTGGTATTGGAGCGGAGTACATGCCGAAGGCGATCACGT
TTCCGATGATTCCGACGATCGTCCTGGCTGTGTTGGTGTCCGTCATGTTGCTATGTATCTCGACGAATTTTCGTGTTTTTATAAAT
TTTCTCAAAGATCTAATAGATTTCTAGAGAAAAAGAATATTAGATTAATTAATTTGATTCTTCTTTCTATATATATATAATATATT
TCTTTACAGTTTTGTCTTCTTGTTTCTGATATGTGATAGGTTAGGTTTGATTTGATGAAACAATCCTTTTTTTGTTTTTTCCAGTA
TTTGGATTATTTTTGGTTTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_201091 nodulin MtN3-like protein [Arabidopsis thaliana]6062e-060
XP_002866519 hypothetical protein ARALYDRAFT_496468 [Arabidopsis lyrata subsp. lyrata]5953e-059
CAE47557 seven-transmembrane-domain protein 1 [Solanum lycopersicum]4394e-041
BAB10854 unnamed protein product [Arabidopsis thaliana]4342e-040
XP_002511420 conserved hypothetical protein [Ricinus communis]4296e-040

Swiss-Prot top hits (Blast detail)Scoree value
Q8LFH5 Protein RUPTURED POLLEN GRAIN 12421e-019
Q6NTJ7 RAG1-activating protein 1 homolog1839e-013
Q5EAL3 RAG1-activating protein 1 homolog1792e-012
Q290X1 RAG1-activating protein 1 homolog1523e-009

TrEMBL top hits (Blast detail)Scoree value
Q70ET6 Seven-transmembrane-domain protein 14393e-041
Q9FM10 Similarity to MtN3 protein4341e-040
B9RB45 Putative uncharacterized protein4294e-040
B9IEQ0 Predicted protein3864e-035
A5ANZ5 Putative uncharacterized protein3793e-034

Arabidopsis top hits (Blast detail)Scoree value
AT5G62850.1 AtVEX1 (VEGETATIVE CELL EXPRESSED1)6075e-063
AT3G28007.1 nodulin MtN3 family protein3702e-035
AT5G40260.1 nodulin MtN3 family protein2421e-020
AT1G21460.1 nodulin MtN3 family protein2374e-020
AT4G15920.1 INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3 and saliva related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), MtN3 and saliva related transmembrane protein (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: nodulin MtN3 family protein (TAIR:AT3G16690.1); Has 546 Blast hits to 527 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 194; Fungi - 0; Plants - 300; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).2365e-020

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
93  100%

Unigene MembersMember information