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Information for unigene UN07061
| FASTA Sequence |
| Unigene ID: UN07061 | Length: 2073 |
SSR | | GGTAAAAAAGAAATAGATTAAAATCGACTAGACGCGAATGTATGGGGTGCTATAGCGTCATAGCGTGGGTGTACGGCTAACAGACA
CTCAGCGTATCAAAACCAAAAACTATATCTGAAATACAAAACTTAGGTATCACAAATCTCCCAATACCTGCAATGTTTTTTACTTG
ACGAGTTGGCTACTCTTTCGACATCACTCAGCATTTGCCCTCATCTTGAGGAATGTTGAATGTCCACCCTGGAAAATCTGAATCCT
CAAACAGAGATGTTGGAACCGCTTTGTAGAAGGCTAATGGAACTTGTTTTACCCTTCTTCGAATCTCGTCCCCGAAGATGGTGGCA
TATGAACCCGAGCTGAAATCTTCTATTTTCATCTCAGTAGTTTTTGCTCTGATTGTTAGATCAGTTTCCAGCGATGAAACAAACCT
TGAAACAGGTGGGCAGTAATGGTGGCGCAATGTGTCAATCTCCCATAGAGAACTTTTCATGGCACCAGTTTTCTTGAGATCAGTTT
CCTGGTTGTTGAAGTAGTCGATACCAAGCTTCTTGTTGGTCTTTGGCCTGCTGCTCTCATTGTCTTCGTCAGCCTCTGAATTGGCT
TCATTGGCGTTTTCAACGGGTTCCTGATGAACAAGATGGTTGATTGTAGGATGTCTACGCAACAGGTTGTAGATCAAAGCCGTTAT
GACAAGAGATCCCGAGGGAGGAACAGAGAGTGACAATCTGCTAAGTTTCTTTGCGAACGAAGCTGCCAGATATGCTGGAAGCAATG
ATGACTTAAGGCAAGCATCAAGAAGCTGGAGAAATCTTGCTCGGTGCTTGGCCACAAAGACCGAAGGAACCAGTAACGCATAGAGC
TTTTCATAAAAGTTTGGATATTCTAGACCATGCTCGGTCATGAGGATGAAGAGGCTGCTTAGAGCCATTACACTGACAACTCCTCC
GATATCATATGATTTTGTTAGGAAGTCGCACAACATTGCAGGATTAGACAGATGGGGAATGACTGTCTGGTGAATACTAGCAAGAA
CCTCCTTGTAAACGTCAAGGGGAAGAGGCAGTCTGAGAAAAGAGATCCATGCTTTTGTGAACTTCAGCTTCATCCTCTTGGCAATT
GTAGTCGGAGAAAGAAGATTGCTGTCTTGATCCTTGTTCTTTTTCTTCTTTTTATCTTTCGGTTTCTCACTACTACTTTCATCTGA
ACCACTCCACATCTCATGGCCAGACTTTTCAGCTTGTTTTTGAGGTGGTGGAGTTCGAGATAAAACTTGATAGATCTTGCGAATAG
AGTGCTCCAGGCTGTCTTTCGATTCATTCTCAGTCTCACTATTTTCATTCACGGTTCTGTCAGCAGAAACAGCTGAGGCTTCCAGA
GTTTTCACAAACTTTTCCATGCTGATGTATGTAAAATATCGGACATCAATGTACTTGAAGTAGTTTGAGTTAAGTATATCCAAGAA
TATATCAGCATCAACTGCAGAATGAATAATAGCATTAAGTATCCTATGGTAGATGGAAGAGTGAAATCTTCCGGCATTCAGAAGCT
TTACAAACTCCATCAACGTGCCCAAAACAATATCCCTTAGAGTATCTTCCGACTGTTGGGAGACGAGAACATCGAGGAGAAGCTTC
ACGAACTCGTCGAACTTGGATCTCAGCCAAGCTCTGAGGACGACTTCAGGGTCACCATCGACTTCATCAGCCGTCTTGGTCTTTGA
AGACGAATCGTCTTCTTCTTCTTCTTCTCCGGAACGAGGGCGTTTCGTTGAAGAAGGAGGAGGTGAGGAGGGAGGAAGCTGAGAGA
GGAGAGGGGTGAAGAAGGACTGGAGGGAGAGGAGGGATTCCACCACGAACTGCGGCGGAGATGAAGGAGAGATGAAGGAGAGGAGG
AGGGGGAGGTTGTTGATGTGAGATCGAGATGAGAGTAGGTCGGAGCCTAGTGACTTTAGCTCTTTCAAGGTGTGGTTTTCTTTCTT
CTTCGAGAGGATTGATGCCATTGTTGAGCTCTCTCTCTCTCTCTCGCTCTCTCTGATTCGTTCGTTCGTGGCGGAGGCAAACGACG
GAAGAAGCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002884044 hypothetical protein ARALYDRAFT_480608 [Arabidopsis lyrata subsp. lyrata] | 2189 | 1e-243 |
| NP_179316 CCAAT-binding factor [Arabidopsis thaliana] | 2159 | 3e-240 |
| AAL57663 At2g17250/T23A1.11 [Arabidopsis thaliana] | 2157 | 5e-240 |
| XP_002313577 predicted protein [Populus trichocarpa] | 1650 | 3e-181 |
| XP_002531130 nucleolar complex protein, putative [Ricinus communis] | 1475 | 6e-161 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q06512 Nucleolar complex protein 4 | 476 | 2e-046 |
| Q8BHY2 Nucleolar complex protein 4 homolog | 461 | 1e-044 |
| Q5I0I8 Nucleolar complex protein 4 homolog | 457 | 3e-044 |
| Q6NU91 Nucleolar complex protein 4 homolog B | 449 | 2e-043 |
| Q9BVI4 Nucleolar complex protein 4 homolog | 444 | 9e-043 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8VZE1 At2g17250/T23A1.11 | 2157 | 3e-240 |
| B9HPX1 Predicted protein (Fragment) | 1650 | 2e-181 |
| B9SYR1 Nucleolar complex protein, putative | 1475 | 4e-161 |
| Q01K64 H0307D04.2 protein | 968 | 3e-102 |
| Q7XP58 OSJNBa0013K16.9 protein | 968 | 3e-102 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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