Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN07068

FASTA Sequence
Unigene ID: UN07068Length: 1204 SSR 
CCTTCTTCTTCTTCCTTTTCTTCGCTGCAGCACTCTCTTCTTCTCCTTCCTTCTCACCATCATTCTCTACAGCTGCTGCAACAGGC
TGAGGCTGAGCTTGAACTTTCTCTTCTTCAGCAGGTTTTCCAGCAACAGGGCCTTCTCCAAGCTCAGCAAGAAGCTTGTCCAAATC
ATCCTCTTCCTGTACTGTCCTCCCACTCTTGTTATTCTTCTTCTTTTTCTTACTCTTCGCAGGCTCTACAACCTCTACAACACTCT
TAGCATCAGAAGCTTTATCCTTACTCACTTCCTCAGCAACTGAGTCATCATCACCTACCGACGCCAAAACACTACTTCCCTTCTTC
TTAGACGACTTCTTCTTCCCCGTAAACATAATCTCAGGCCTCTCTTCCTCCTCAACCGCATTACTCTCCTCTTCATCATCATCAAG
CAAAGCAGCCGCAAATGAATTCCCACTCTTCTTGGAAGACTTCTTCTTACCAGAGAAAGTGATTGGATTCACCTCTTCCTCCTCCT
CATCTTCATCATCAAGTAAAGCAGCCGCAAATGAATTACCACTCTTCTTGGAAGATGACTTAGAAGACTTCTTCTTACCAGAGAAA
GTGATTGGCTTCACCTCTTCCTCCTCCTCCTCCTCTTCACCATCACCACCAAGTGCATCAAAAGCTGGAGCAGCAAAAGACTTACC
ACCCTTCTTAGGCTCATCCTCCTCCACTTCATCATCACCATCCTTATCATCTCCACCATCACCATCATCATCATCTAACAAAGCAA
AGCTAACGGATCCACCACTACCTTTCTTAGACTTAGACTTCTTCTTCTTCCCTTCAAAAGCAATCTCCGGAACAACAACATCATCT
CCTTCTTCATCATCATGAACGGCACCTTTCTTATCACCTTTCTTACTCTTCTTCTTCTTCCCAGTGATAACAACAACCTTGTCTTC
CTCGCCTCCTCCTTTAGGCGGATCCTCGGAGAGCTCCGTACCTATGGAGTACTCATCGTCATCGATCTGAACACCTTTCTTCTTGG
ATTTACCACCACCACCGACGACGAGAGACGAAGCAGCTGGTTCGTCGTCTCCGCCACGAGCACTAGGCTTCTTCCGCCCCATTTAT
ATCTTACGTCGGAGAGAGAGAGGGAGGGATGAAGCGTGGTTGGTTAGGGTTAGAGAGATTCGGAGATAGCGCGGCGGCGCAGAGAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002889103 hypothetical protein ARALYDRAFT_476840 [Arabidopsis lyrata subsp. lyrata]5344e-052
NP_177807 translation initiation factor eIF-5B [Arabidopsis thaliana]4914e-047
AAF04442 putative translation initiation factor IF-2; 73082-68138 [Arabidopsis thaliana]4914e-047
AAO00740 putative translation initiation factor IF-2 [Arabidopsis thaliana]4861e-046
AAF04435 putative translation initiation factor IF-2; 35582-30916 [Arabidopsis thaliana]4718e-045

Swiss-Prot top hits (Blast detail)Scoree value
Q8MP30 Uncharacterized histidine-rich protein DDB_G02745571749e-012
P04929 Histidine-rich glycoprotein1452e-008

TrEMBL top hits (Blast detail)Scoree value
Q9SRD2 Putative translation initiation factor IF-2; 73082-681389322e-098
Q8GUM6 Putative translation initiation factor IF-2 (Fragment)9277e-098
Q9SRE1 Putative translation initiation factor IF-2; 35582-309164715e-045
Q9SRD1 Putative translation initiation factor IF-2; 74568-789724591e-043
B9I4W6 Predicted protein4537e-043

Arabidopsis top hits (Blast detail)Scoree value
AT1G76810.1 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein9321e-100
AT1G76820.1 GTP binding / GTPase4363e-043
AT1G76720.1 GTP binding / GTPase/ translation initiation factor3989e-039
AT1G48920.1 ATNUC-L1; nucleic acid binding / nucleotide binding1254e-007
AT4G11720.1 HAP2 (HAPLESS 2)1156e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
93  100%

Unigene MembersMember information