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Information for unigene UN07168

FASTA Sequence
Unigene ID: UN07168Length: 851 SSR 
GCACGAGGGAACGATGCAGTCGTCCGCATCAATCTCATCGCCTTCTTCTCAAGCTCTTCTCTCAACCAAAACTCGATCTCCACTCT
CCTTCTTCTTCTTCCTCGCTCCCAAAGCCACAACCAGAATCCCTGATGATCATCTTCCTTCTTCTCTCTTTGCTTCCCGTCGACCC
CGCGATTTCATCAACGGGAGGGATGACTTGAGCTGGAACCGGAAGATCAGACCTGAGTACGAGTTCGATGAAGAGGAAGACGAGCG
TGATGAGGAAGAAGAAGAAGAAGAAGAAGATAGAAGCTTGGATCTTTTACTTAGGTTCGTCGAGAATGTCTTCAGAAAAGTCTCCA
AGAGAGCTAGGAAAGCCGTCCGATCAATCTTGCCTGTTTCCATCTCCACCAAGCTCGTGGGTTTCTCAGTGAATGGCGTACTTATA
CTTGCTCTTTTGTGGATCTCGAAGGCCTTTCTCGAGGTAGCTTGCACACTTGGGACTATTGTATTTACGAGCATTCTACTTATACG
GGGACTTTGGGCTGGTGTAGCATACGTACAAGAAAGCCGCAACAACCGGATCAACGAACTCGCTGATGACCCTCGTGCTTGGAACG
GGGTGCAACCAGCGTCACGATTAAAAATGTTTCAGAGAATCTCAAGTTCCTGACTTTCGAGAGAGCCAAAACCGGTTTAGGTGGTT
CTCCCCCAAGGCAATAAAACGACAGCTGAGTTCTGAATCACGAAGCAGTTACAGTGGATGATGTTCTTTCGCTATGTGTGTTGATT
TAGTAATTAGAAAAGAACACAAAATTGTAATACTTGTAGCATTTTACAAAGTCACCTATGGAAGCTTGGCATGTAGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002867158 hypothetical protein ARALYDRAFT_491300 [Arabidopsis lyrata subsp. lyrata]7771e-080
NP_567935 uncharacterized protein [Arabidopsis thaliana]7313e-075
XP_002522105 conserved hypothetical protein [Ricinus communis]4993e-048
XP_002298793 predicted protein [Populus trichocarpa]4851e-046
XP_002276036 PREDICTED: hypothetical protein [Vitis vinifera]4822e-046

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8LCF7 Putative uncharacterized protein7312e-075
B9S7Y9 Putative uncharacterized protein4992e-048
B9GIN1 Predicted protein (Fragment)4857e-047
O81894 Putative uncharacterized protein AT4g337803962e-036
C5WRR6 Putative uncharacterized protein Sb01g0420603862e-035

Arabidopsis top hits (Blast detail)Scoree value
AT4G33780.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: SHW1 (SHORT HYPOCOTYL IN WHITE LIGHT1) (TAIR:AT1G69935.1); Has 20 Blast hits to 20 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).7311e-077
AT1G69935.1 SHW1 (SHORT HYPOCOTYL IN WHITE LIGHT1)2704e-024

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
151  33%
 
92  67%

Unigene MembersMember information