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Information for unigene UN07276

FASTA Sequence
Unigene ID: UN07276Length: 755 SSR 
CGGCACGAGGCTCCCTCGCCGCCACCTTCTCCTCTCTCTCTCTCTCTGTCGAACTCGCAACACCCTTCAGAACAAACTGAATTGTT
CCCAAAGAAAGGATGGTGACTGAAGAAGACAAGATATTCGCCAAGAACTTCTGCATCGACGACCTTCCCGACGTCCCTGCCGGACT
CCCACCGCATCTGAAACTCAAGCAAAACCGTGTCGTCTCTAAAAAAGATGCTTCCGTTGTTGATACTGGAGATGCCATTTACTCGG
GTAGCTATGTCTCTTCGGGAGTGGACAACACTATGAAGTTAGGAAACTTCTATGAGGATTTCAAAGTTGATGTGATTAGTTGCACC
GAGACAGACATGGAGTTTGACATGATCGGTATCGATGCTGCATTCGCCAATGCTTTCAGAAGGATCCTTATAGCTGAGGTTCCTTC
AATGGCTATTGAAAAAGTGCTTATAGCATACAACACGTCGCTTATTGTAGACGAAGTTCTTGCTCACAGGATTGGTCTTATTCCTA
TTGCCGCAGATCCAAGGCTCTTTGAGTATTTAACCGATACCGACCAGCCGAATGAGAAGAACACCATCGTTTTCAAACTCCATGTG
AAATGTCCAAAAGGTCAATCACGTCTTCATGGTTTTAACGAACGAGTTGCAATGGTTACCAAATGGAAGTGAGTTTCTCAAAGAAT
CAGGAGATTCAACCTCAACCTCGGAGCCAAAAACTTACACTTCATTCAGCTGTAGCCAAGATTCTCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002886582 ATRPAC42 [Arabidopsis lyrata subsp. lyrata]7001e-071
NP_176282 DNA-directed RNA polymerase subunit [Arabidopsis thaliana]6945e-071
NP_974057 DNA-directed RNA polymerase subunit [Arabidopsis thaliana]6945e-071
AAM64255 RNA polymerase subunit [Arabidopsis thaliana]6901e-070
AAB00528 RNA polymerase subunit [Arabidopsis thaliana]6892e-070

Swiss-Prot top hits (Blast detail)Scoree value
Q54SN4 DNA-directed RNA polymerases I and III subunit rpac13431e-031
O15160 DNA-directed RNA polymerases I and III subunit RPAC13376e-031
Q32L22 DNA-directed RNA polymerases I and III subunit RPAC13368e-031
P52432 DNA-directed RNA polymerases I and III subunit RPAC13197e-029
O94616 DNA-directed RNA polymerases I and III subunit RPAC12694e-023

TrEMBL top hits (Blast detail)Scoree value
Q3ECL4 Putative uncharacterized protein At1g60850.36943e-071
Q9C6C2 RNA polymerase subunit6943e-071
Q8LD68 RNA polymerase subunit6901e-070
Q39215 RNA polymerase subunit6891e-070
Q39216 RNA polymerase subunit6334e-064

Arabidopsis top hits (Blast detail)Scoree value
AT1G60850.3 ATRPAC42; DNA binding / DNA-directed RNA polymerase/ protein dimerization6942e-073
AT1G60850.2 ATRPAC42; DNA binding / DNA-directed RNA polymerase/ protein dimerization6942e-073
AT1G60850.1 ATRPAC42; DNA binding / DNA-directed RNA polymerase/ protein dimerization6942e-073
AT1G60620.1 ATRPAC43; DNA binding / DNA-directed RNA polymerase/ protein dimerization6333e-066
AT2G15430.1 NRPB3; DNA binding / DNA-directed RNA polymerase/ protein dimerization1557e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
181  33%
 
211  33%
 
201  33%

Unigene MembersMember information