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Information for unigene UN07287
| FASTA Sequence |
| Unigene ID: UN07287 | Length: 771 |
SSR | | GAAACAAACCTTCTGAGATTTCGCCGGCGAGAGAAGAGAGAGAGATCCAACGGTCGAGATGTTCCTTCGCGCAATCGGACGGCCAC
TACTGGCTAAAGTGAAGCAGACGACTGGGATCGTCGGTCTCGACGTCGTGCCGAACGCGAGGGCGGTGCTGATCGATCTCTACAGC
AAAACCCTAAAGGAGATCCAGGCCGTGCCGGAGGACGAAGGATACCGCAAGGCGGTGGAATCGTTCACGCGCCACCGTCTCAACGT
CTGCAAAGAAGAGGAAGACTGGGAGGCGATCGAGAAGCGCCTCGGCTGCGGTCAAGTCGAGGAGCTCATCGAAGAGGCGCAGGACG
AGCTCACGCTCATCGGGAAAATGATCGAGTGGGACCCTTGGGGTGTTCCAGATGACTACGAGTGTGAAGTCATTGAGAACGATGCA
CCGATTCCAAAGCACGTTCCTCAGCACCGACCTGGTCCACTTCCTGAGGATTTCTACAGAACCCTTGAAGGTCTGATTTCAGAGTC
CAAAACAAAAATCCCAGCTGCTGCTGCTGCTACTACCTCCACTGATCCGCAGTTGAAGGAGTAACTTCCAGATTTTCACATTGTTT
GTTTGTGTACTTGTTTGCTTTGTTTGGCTACTGTTCAGAGACAGCGAGCCTCTGAATAAACTGGTTCATAATAATCTTTTGAAAAC
TAGAACAATGCCACTCGTTTCATAAATGTTTTTTATCTTTCTTCTCAAAGACCACCTATGATAATACAAATGATGTTTCATCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002864198 hypothetical protein ARALYDRAFT_495348 [Arabidopsis lyrata subsp. lyrata] | 820 | 1e-085 |
| NP_568778 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 5 [Arabidopsis thaliana] | 813 | 8e-085 |
| XP_002327504 predicted protein [Populus trichocarpa] | 709 | 9e-073 |
| XP_002513634 NADH dehydrogenase, putative [Ricinus communis] | 706 | 2e-072 |
| XP_002305272 predicted protein [Populus trichocarpa] | 700 | 1e-071 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FLX7 Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial | 813 | 4e-086 |
| Q559Z4 Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 | 213 | 1e-016 |
| P0CB99 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 | 179 | 1e-012 |
| Q18359 Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 | 172 | 8e-012 |
| P80266 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 (Fragment) | 145 | 1e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9MX65 Predicted protein | 709 | 7e-073 |
| B9RIR5 NADH dehydrogenase, putative | 706 | 1e-072 |
| A9P8K8 Predicted protein | 700 | 7e-072 |
| C6T2Y2 Putative uncharacterized protein | 685 | 4e-070 |
| Q8W544 NADH-ubiquinone oxidoreductase (Fragment) | 616 | 4e-062 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G52840.1 NADH-ubiquinone oxidoreductase-related | 818 | 9e-088 |
| AT4G28005.1 LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: NADH-ubiquinone oxidoreductase-related (TAIR:AT5G52840.1); Has 20 Blast hits to 20 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 174 | 4e-013 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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