 |
Information for unigene UN07327
| FASTA Sequence |
| Unigene ID: UN07327 | Length: 1395 |
| SNP | GGAGCCCAATTACATACTTCTTTCCAACCAGAAACCTTGTTAGTTTGTGTTTGAATAATAATTTAGGAATCATAATCATCGGAGGA
GATGGGCGGAGACGGCAAAGTGTTCACCTTGGCAGAGGTTTCTGAGCATAGCAGCAGCCAGGATTGTTGGATCGTCATCGATGGCA
AGGTTTATGATGTGACAAAGTTCTTGGACGACCATCCTGGTGGTGACGAGGTCATCTTGACTTCTACAGGGAAAGACGCGACGGAT
GATTTTGAGGATGTGGGACACAGTTCCACTGCAAAAGCCATGCTTGATGAGTACTACGTCGGTGATATCGACTCCGCCACTGTCCC
TGCCAAAACCAAGTTTGTTCCTCCTCCTCCTAACCAGACCACCCAGTCTACCCAGAGCTCCGATTTTCTCATTAAGATCCTTCAGT
TCCTTGTTCCTCTTCTTATCTTAGGCTTGGCTCTCGGTATCCGCTCTTACACCAAGACCCCTTCCTCTTGAGGAGTGTCTTTGAAT
GTGTACTACGTGTTTGCCCCCTTTATCTCTGCCTGTCTTTGTAAGACTTCAGATTATTATATTCTCTTTTTGCAACAAACTGGATT
ATGTAAGAGACTTTTGTTTGTCTTTTAATTAAATCAAATCCATTTTACAAGAATACATCATTCACTCACAGCCTAGTCTTGGCACT
CACTTAACAAGCAGCAGCAACAGGTAAAGAGAATATATAAGAAAGAAAATTGATAAGCTGATCAATCCATGCTTGCGCAAGTCCTC
TCCATCACCTTTGAATCAGTTCTGAAAGACTGCTTCGATGGAGAGCTTGATCCTCTTGATGAACTCTGATGATGATTCCCAAAGAA
GCTTAGCTTCCCCATCTTCTTTGAGAAGCTGCTCATGAATTTGCGCGAGTGAGACCTCTGCATATCTCTCTTCATACACACATGCT
CCTTCTCTAGATCGTTGAGTCTCATCCTCAACCTAGTCAACTCCAGTTTCAGCTCCCGGTTCTCTCTCCTCAGAGACGCGTAGTTG
TCTTTTGGTGACATTGCTGCGCTGAGAGCTCCGCTGTTGATTCTCCATGACTGCTGTTGTTGCTGCTGCTTTGGCTTTGTCTCTTC
GTCTGAGTAAGAAGTGCACAAGGAGCTTCTGAGCTTAAGCTGCTCAAAGTAGAGAACCTGAACTATTGATTGCAGAGGAAGACGCT
CGTTCTGCGCAGCGTGTGCTCCTGCCTCTTGTGAGAGTTTCTGGAAGTCGATAAGCTTTGACAGCTTCTTCTTGTCTGAATCTGAT
AATCCTTGATGTGCCTTAAGATAGAGATCAATGGCACGGTACAAGCCATCATGAAGAGTGCGAGCATGAAGCGGCAAAGCTTCTGC
AATGAGCAAGAACTTGGGA
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ33928 unnamed protein product [Thellungiella halophila] | 992 | 4e-105 |
| XP_002863924 phototropic-responsive NPH3 family protein [Arabidopsis lyrata subsp. lyrata] | 983 | 4e-104 |
| NP_199691 Phototropic-responsive NPH3 protein [Arabidopsis thaliana] | 972 | 8e-103 |
| XP_002521098 protein binding protein, putative [Ricinus communis] | 852 | 6e-089 |
| CAN78287 hypothetical protein VITISV_008137 [Vitis vinifera] | 823 | 1e-085 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FKB6 BTB/POZ domain-containing protein At5g48800 | 972 | 3e-104 |
| P49098 Cytochrome b5 | 533 | 3e-053 |
| P49099 Cytochrome b5, seed isoform | 495 | 7e-049 |
| P49100 Cytochrome b5 | 485 | 1e-047 |
| O48845 Probable cytochrome b5 isoform 2 | 484 | 1e-047 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9S529 Protein binding protein, putative | 874 | 1e-091 |
| A5ATD6 Putative uncharacterized protein | 823 | 1e-085 |
| Q9ZWT2 Cytochrome b5 | 589 | 1e-058 |
| A9PB66 Predicted protein | 513 | 9e-050 |
| A9PDU1 Putative uncharacterized protein | 509 | 3e-049 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G48800.1 phototropic-responsive NPH3 family protein | 977 | 8e-106 |
| AT5G48810.1 CB5-D (CYTOCHROME B5 ISOFORM D); heme binding | 590 | 6e-061 |
| AT1G03010.1 phototropic-responsive NPH3 family protein | 488 | 4e-049 |
| AT2G32720.1 CB5-B (CYTOCHROME B5 ISOFORM B); heme binding | 484 | 1e-048 |
| AT5G53560.1 CB5-E (CYTOCHROME B5 ISOFORM E); heme binding | 442 | 8e-044 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
