Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN07330

FASTA Sequence
Unigene ID: UN07330Length: 804 SSRSNP
GGATCAACAACTATCACACAAACTCAAAAATCTATTCTATTCATTTCGTTTTATCATCAGAAAAAAAACATGGTTGCTATTTCAGA
GATTAAGTCGACGGTGGAGACTACGGCGGCGGCCAACTGTCTGATGCTCTTATCAAGGGTCGGACAAGAAAACGTTGACGGTGGGG
GCGCAAAACGTGTTTTCACATGTAAAACGTGTTTGAAGGAGTTTCATTCGTTTCAAGCGTTGGGAGGTCACCGTGCGAGCCACAAG
AAGCCTAACAGTGAGAATCTCTCTGGCTTGATGAAGAAGACCAAAGCTTCGTCTTCGCATCCTTGTCCGATATGCGGAGTGGAGTT
TCCCATGGGACAGGCTCTAGGAGGACACATGAGGAGACACAGGAACGAGAGTGGCGGCGCCGGCGCGTTGGTTACACGCGAGTTAT
TGCCGGAGGCGGCGTTGATGACGTTGAAGAAATCAAGCAGTGGGAGGTTGGCTTGTCTGGATCTGAGTTTGGGGATGGTGGAGAAT
TTGAATCTCAAGTTGGAGCTTGGTAGACCTGTTTGTTGATTTGTTTTTCTTTTTCTTTACCCCTTTTGGCTTTTTCTGGATATATT
AATTAGTTCCCATCATTCTTTGATTTGTTTCCTTAATATTTTAGATTTATACATTTACATCTGCAGATTTAGAAACTTTCATAGGC
CGGGTGTAATATTTTCTTTCCTTTCGTGGTGGAAATATTCTTTACTTGCTTGAGATTTTGTTTTATTATATATATATATTTCCGTT
TAAAGCGTAAAATATAATTTGTAATTCATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABB55254 C2H2 zinc finger protein 1 [Brassica carinata]8228e-086
ABB52061 C2H2-type zinc finger protein [Brassica napus]7815e-081
NP_200790 C2H2-type zinc finger protein [Arabidopsis thaliana]6605e-067
AAM65582 zinc finger protein Zat12 [Arabidopsis thaliana]6507e-066
ADK63406 C2H2 type zinc finger protein [Brassica rapa]6481e-065

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
A1X3G6 C2H2 zinc finger protein 18226e-086
A0RZH1 C2H2-type zinc finger protein7813e-081
Q42410 Putative zinc finger protein Zat126603e-067
Q8LA47 Zinc finger protein Zat126505e-066
Q9LX85 Putative uncharacterized protein At3g460804776e-046

Arabidopsis top hits (Blast detail)Scoree value
AT5G59820.1 RHL41 (RESPONSIVE TO HIGH LIGHT 41); nucleic acid binding / transcription factor/ zinc ion binding6656e-070
AT3G46080.1 zinc finger (C2H2 type) family protein4773e-048
AT3G46090.1 ZAT7; nucleic acid binding / transcription factor/ zinc ion binding4641e-046
AT3G46070.1 zinc finger (C2H2 type) family protein3861e-037
AT2G28710.1 zinc finger (C2H2 type) family protein3521e-033

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
114  57%
 
203  43%

Unigene MembersMember information