 |
Information for unigene UN07340
| FASTA Sequence |
| Unigene ID: UN07340 | Length: 746 |
SSR | | GGACGTCTTCTCCTCCAACCATCGTCAATCGCTGCATCCGATTCGATTCCCCTCGCCATTCCGTCATAAAGCTTGTACGGTGGTAG
TTTTATCGATTCGCGGGGAACATGGCGGCGGCGGCGGCTACGGGATCGGTGCAGAAAGGAGAGGAGGAGTGGCGTGCGGTTCTTTC
ACCTGAGCAGTTTAGGATTCTCCGTCAGAAAGGCACCGAATATCCAGGAACCGGAGAATACGTTGATTTCAACAAAGAAGGAATAT
ACGGCTGTGCAGGTTGCAAGACTCCTCTTTACAAATCAACCACAAAGTTCAACGCAGGTTGTGGCTGGCCTGCATTCTTTGATGGA
ATCCCTGGTGCCATAACCAGAACCGTAGACCCAGATGGGAGAAGAATAGAGATCAATTGTGCAGCATGCGGTGGCCATCTTGGTCA
TGTTTTCAAAGGAGAAGGTTTTGGTACTCCCACCGATGAACGCCATTGCGTCAACAGCGTCTCGCTCAAGTTCTCTCCCGCAGAGC
CTTCCTTGTAAGTCAATCTTTGGCCTTTTTTCTCTCTCTTTTTTTCACCAAAGAGAGTGAAGAAAAGACAGAATAAGAATCATGCA
AGTGTGCCTATATAAATACTGTTGTGATGGTTTATCTTTTGCTCTTGTTTGTATTTGTTTTTTTCTTTTCAAATATACATCATCTG
GGTCATTTTGTGACACAACTGTATGATTTGCACCTAAATAAAACCCACCTTTGCTAGC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_567271 peptide methionine sulfoxide reductase B3 [Arabidopsis thaliana] | 679 | 3e-069 |
| CAB80845 putative protein [Arabidopsis thaliana] | 676 | 6e-069 |
| AAD03449 contains similarity to Methanobacterium thermoautotrophicum transcriptional regulator (GB:AE000850) [Arabidopsis thaliana] | 672 | 2e-068 |
| XP_002872710 hypothetical protein ARALYDRAFT_327414 [Arabidopsis lyrata subsp. lyrata] | 668 | 5e-068 |
| ABU49226 chloroplast methionine sulfoxide reductase B2 precursor [Nicotiana tabacum] | 635 | 3e-064 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9M0Z6 Peptide methionine sulfoxide reductase B3 | 679 | 1e-070 |
| Q9C5C8 Peptide methionine sulfoxide reductase B2, chloroplastic | 614 | 4e-063 |
| Q6AUK5 Peptide methionine sulfoxide reductase B3, chloroplastic | 595 | 7e-061 |
| Q9ZS91 Peptide methionine sulfoxide reductase B5 | 589 | 3e-060 |
| Q10L32 Peptide methionine sulfoxide reductase B5 | 589 | 3e-060 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A7U629 Chloroplast methionine sulfoxide reductase B2 | 635 | 2e-064 |
| B7S5L0 Methionine-R-sulfoxide reductase B1 protein | 628 | 2e-063 |
| B7S5L1 Methionine-R-sulfoxide reductase B2 protein | 628 | 2e-063 |
| B9RX37 Methionine sulfoxide reductase, putative | 622 | 8e-063 |
| B9HN65 Methionine sulfoxide reductase type | 615 | 5e-062 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G04800.1 methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein | 680 | 9e-072 |
| AT4G21860.1 MSRB2 (methionine sulfoxide reductase B 2); peptide-methionine-(S)-S-oxide reductase | 615 | 3e-064 |
| AT4G04830.1 methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein | 589 | 3e-061 |
| AT4G04810.1 methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein | 558 | 1e-057 |
| AT4G21850.1 methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein | 531 | 2e-054 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
