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Information for unigene UN07348
| FASTA Sequence |
| Unigene ID: UN07348 | Length: 1313 |
SSR | | AGAAGAAAAAAAAAATAGATTCCTCGTAACTTCTCCTTCACCGATCACTCTTTCTCTCTCTCCGCCGTTGTTTCACGCCGACGAAC
TTGATCTCCGATTTATCCATAGTTTCTCTACAGACGTAACCTTCGTTATGGATCCGTCGCACCAGCGTGTTGAGCAGCCTCAGGTA
ACTCCTCCTCACGATAACGAGGTTACTGAATCGCGTGGTGTGGTTGTTATGGAATTATAATCGGAATCTGGAAGCTGTTTTGTTGA
GAATATATATCATGATGATAGTGATATTGATGCGAACAGCCTCAGTGATTTTGATGAACTCGATGACGATTCTGGGATTCGATTTC
GCGATATCAGTGAGATCCGGTTAATTTCGGTCGAATCGGGTTCTGATGACGATCCTGAGGATGAGAGGGAGATATGGGGCATCGAT
TTGAACGAAGACCATGTATATGATGATGATGATGATGATGATGATAATGATGATGATGTTAGTGTGACTATACATTCACTCCAAGT
AGAGGATCGTGCTGATGAATTTGATTGGGAAGAAGTTGGTGGTGAAAGGGAGATACGAAGCGGTTTCGCAGAAGCTAACATCTCTC
TAGAAGATTTAGCTAGAGATGATGACTCTGGGAATCTTGAGTGGCAAGTTTTGATGAACTCTCATACTCTAGAGATCAACTTCGAT
GTGGAAAACAGAGAGCTGCACATCGTTGGTGATCATGAAGATTACATTCACACGGCTGAGTATGATCTCTTGTTTGAACAGTTTGC
TCAAGCTGGGATCACCAATCTCCGTTTCCCTCCAACTTCCGTATCTTTCATCAAGAACCTCCCAGTGGTTGTTCAGCTTGATGTTG
AGGATGGTGACTGTGCGGTTTGTAAAGATGAGATGAGCATCGGGAGCGAAGCTGTTCTTCAGTTGCCTTGTAACCATAAGTACCAT
GGAGAATGCATTGTACCGTGGCTCGAAACGAGGAACACGTGTCCTGTTTGTCGTTATGAGTTGCCTACGGATGATGTAGACTATGA
GCGAAGGAAGAGACATATAAGGAGATTGTGATGCTGTATGGTAAATGGGTTGGTTAACATCCTCTATATATGGTTTTTGTCTTTTG
AATATTGAAGCTTGTGTGTGTATTAGTATGTTTGTATTGAGTCAAGCTTTTTCTTAATTTATATTTGTATTAGCCTCATTGTGTGA
TCCATGTGATGGTGTAGGCTTGAGGAGGTTAGCTTTATGTAGAGGAACATGTGTGTATATTATTGTTTGCTTGGACAAGGTTTATA
CATGTATGCATCCTTGAGCAAAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002871309 zinc finger family protein [Arabidopsis lyrata subsp. lyrata] | 524 | 6e-051 |
| NP_850790 RING/U-box domain-containing protein [Arabidopsis thaliana] | 515 | 7e-050 |
| AAL25539 AT5g08140/T22D6_80 [Arabidopsis thaliana] | 515 | 7e-050 |
| CAB93715 putative protein [Arabidopsis thaliana] | 515 | 7e-050 |
| XP_002514591 zinc finger protein, putative [Ricinus communis] | 405 | 4e-037 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SPL2 E3 ubiquitin-protein ligase CIP8 | 217 | 1e-016 |
| Q9P0P0 E3 ubiquitin-protein ligase RNF181 | 198 | 2e-014 |
| Q9CY62 E3 ubiquitin-protein ligase RNF181 | 198 | 2e-014 |
| Q3T0W3 E3 ubiquitin-protein ligase RNF181 | 195 | 4e-014 |
| Q6AXU4 E3 ubiquitin-protein ligase RNF181 | 195 | 4e-014 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8GYG0 Putative uncharacterized protein At5g08139 | 515 | 5e-050 |
| Q93Z52 AT5g08140/T22D6_80 | 515 | 5e-050 |
| Q9LEZ2 Putative uncharacterized protein T22D6_80 | 515 | 5e-050 |
| B9RLH2 Zinc finger protein, putative | 405 | 3e-037 |
| A5BBE0 Putative uncharacterized protein | 388 | 3e-035 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G08139.1 zinc finger (C3HC4-type RING finger) family protein | 515 | 3e-052 |
| AT5G60820.1 zinc finger (C3HC4-type RING finger) family protein | 393 | 4e-038 |
| AT3G02340.1 zinc finger (C3HC4-type RING finger) family protein | 279 | 6e-025 |
| AT5G01980.1 zinc finger (C3HC4-type RING finger) family protein | 277 | 1e-024 |
| AT5G15820.1 zinc finger (C3HC4-type RING finger) family protein | 254 | 5e-022 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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