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Information for unigene UN07389
| FASTA Sequence |
| Unigene ID: UN07389 | Length: 2380 |
| SNP | GGTAGTACGAGGAGGGAATTGGCCCAAAAATTGGTACCTAAACCAATCATCATATCTTTGGCCAAGTATCCTACAAAGAGACTCCC
GAGAGCCAGAAGTATTAAAGGAATGGCCATAGGAATGGGCGCATCATGACATCGTGAGATGTCTCGCCCGAACGAATTAGTTGGTA
CTAGAAATGTGAGAAAAAGTAAACGAAAAGAGTAATAAGAAGTGAAAAGGACAGAAATACTTCCCAACCAGAAAGCAAAGTTCCCA
CTGATGGTATACTTAGTGTAAGCGAGCTCTAAGATCACATCTTTGGAATAAAATCCAGTTAGAAAAGGAAATCCAATTAGAGATAA
GCTGCCTATGAGCATCATGGCATAGGTCAAAGGGAAGGAGGAGGCAAGCCCCCCCATCTTCCGCATATCTTGCTCATCCGACATGG
CATGAATCACCGAACCAGCACTCAGGAATAGTAATGCTTTGAAAAAGGCGTGATTCATTAAGTGAAAGACGCTAACCGAATAGTTA
GAGATGCCGCAAGCAAAGATCATATAGCCTAATTGACTACAAGTTGAATAAGCGATGACCCTCTTTAGATCGTTCTGTAATATTCC
AGTGGTTGCCGCAAGGAATGACGTCATAGCTCCTGCAAAAGTAATAACAATCAAAGCCGTAGGTGAGTATTCAAATAAAGGGGAGC
ACCTTGCTATCATAAAAACGCCAGCTGTTACCATAGTAGCTGCATGAATCAAAGCGGATACTGGAGTGGGACCCTCCATAGCATCG
GGTAACCAAGTATGCAATCCTATCTGTGCAGATTTCCCAACAGCACCAATAAAAAGTAAAATACAAATAAGACTTATAGCATTAAA
TCTCATATTGCAAAAAATCCAAGAATTTCTGGGAACACTAGCACAAGCAAAAATGGTTGAAAAGTCTACTGTTTGAAAGAGAGTAA
AACAACCCAAAATCCCAAGAGCTAATCCAAAATCACCTACTCGATTGACAAGCGTAGCTTTTATAGCTGCTTTATCTGCCTGAAGT
CGTGTAAACCAAAAATGAATTAACAAATATGAAGCAAGACCTACTCCCCCCCATCCCAGGAATAATTGAAGAAAGTTATCTCCAGT
CACCAACATTAGCATAAAAAAAGTAAAAATGGATAAATAACACATAAATCGAGGGCTATGCGGATCCTCGGACATATATGAAATGG
AATAAAGATGGACCAAGCTACTTATGAATGTAACCACAATTAACATCACTACGGTCAGGCTATCGAACAAGAAGCCCCAAGAAGCA
TCAAACATTTCCGATGAGATCCATGGAGCAATTCTTAGATAGCAAGCACTAGCTCCCAGTGCGACTTCATAAAAAGCAATCAAAGA
TAAGATCGAAGAGAATGAAACGCACGTAGTGGTCAGAATAGCGCTTCCTTCTGATCCTAGAAAACGTCCGAAAAAACCTGCTACGG
AACTACCGAGCAGGGGTAAAAATACGATAAGTAGATACATAATTTCGAGTGTGATCAGAAACCTAAAATCAGACAATGACAGAGCG
GCCAGCGATTGAGTGATAGATTTCTCGACGTCTGGAGAACGCTCGACCGAAGAAATGAGTAACTAACAAGGAAGATTTTGTTCCCC
AACTTGCTTGATTAACGGGCATTTTCGGGGACTAGCCCGCTTCCCATTACTCAAGAGGGCAATTCCTCGCACATAATCAAATTAAG
GGAGCCATTGAAAGGTGACTAAAAGACCAGAAACAGGGACTACCCGAGCTAATGATAGAGGCAAGAACACTTTCCGGCCAAGTCCC
ATTAATTGATCATAACGATATCGTGGAAATGCTGCACGGACCCATATATATAGGAACAGAAAGAGAAGAACCTTGATACTAAACCA
GATCGAGCCCGGGATCTTCTTGAAAATGGGAAGATCTAGGATAGGCGGCCAACCTCCTGGAAAGAACAATGTACATGGACCAGGTG
AGTAGGGATGCAGCTCCGTGGACCGCTCGTCGGGCCTGATAGGTGGTGGTATCACACCCTTCTCAAAGAAACCGTACGTGACACTC
TCGCGTCATACGGCTCCGCCCCGGAATCATGCTTACGCCCTCTCCTTTCAGTCGAGTCACTCCGAGGAACGCCTTTGACCAAGGGG
TCCTCGAACCAACCTGTCCTCCCTTTCTATTCCTAGTCAGGCGTTTTCATTCATTCATTGATTGATTCAAGGTACGAAGTGACAAG
TCCAAGCGATAGCGGTAAAAGCTAGTCGCCGGAAGCGAACTTCCGGGCCGGGAAGGGGCCAAAAAAACGTGAGCGCCCCTGCAATC
TTTCTAAAGAAACAAGCGAGAAACTTGACTTTGAGAAATACCTTATTATATATAATTA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| YP_717097 NADH dehydrogenase subunit 5 [Brassica napus] | 2550 | 2e-285 |
| ACH78247 NADH dehydrogenase subunit 5 [Arabidopsis thaliana] | 2533 | 1e-283 |
| P29388 RecName: Full=NADH-ubiquinone oxidoreductase chain 5; AltName: Full=NADH dehydrogenase subunit 5 | 2525 | 1e-282 |
| YP_003587344 NADH dehydrogenase subunit 5 [Cucurbita pepo] | 2516 | 1e-281 |
| NP_064039 NADH dehydrogenase subunit 5 [Beta vulgaris subsp. vulgaris] | 2513 | 3e-281 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P29388 NADH-ubiquinone oxidoreductase chain 5 | 2525 | 5e-284 |
| Q37680 NADH-ubiquinone oxidoreductase chain 5 | 2496 | 1e-280 |
| P10330 NADH-ubiquinone oxidoreductase chain 5 | 2486 | 2e-279 |
| P26849 NADH-ubiquinone oxidoreductase chain 5 | 2291 | 7e-257 |
| P48920 NADH-ubiquinone oxidoreductase chain 5 | 1630 | 3e-180 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q6YSR2 NADH dehydrogenase subunit 5 | 2550 | 1e-285 |
| B5TM94 NADH dehydrogenase subunit 5 | 2533 | 1e-283 |
| D5I3G8 NADH dehydrogenase subunit 5 | 2516 | 1e-281 |
| Q9MF46 NADH dehydrogenase subunit 5 | 2513 | 2e-281 |
| D5I3C3 NADH dehydrogenase subunit 5 | 2508 | 8e-281 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| ATMG00060.1 Mitochondrial NADH dehydrogenase subunit 5. The gene is trans-spliced from the three different pre-cursors, NAD5a, NAD5b and NAD5c. | 2401 | 1e-270 |
| ATMG00513.1 Mitochondrial NADH dehydrogenase subunit 5. The gene is trans-spliced from three different pre-cursors, NAD5a, NAD5b and NAD5c. | 2401 | 1e-270 |
| ATMG00665.1 Mitochondrial NADH dehydrogenase subunit 5. The gene is trans-spliced from three different pre-cursors, NAD5a, NAD5b and NAD5c. | 2401 | 1e-270 |
| ATCG01010.1 Chloroplast encoded NADH dehydrogenase unit. | 815 | 9e-087 |
| ATMG01120.1 Encodes subunit of mitochondrial NAD(P)H dehydrogenase that is trans-spliced from three precursors, NAD1A, NAD1B, and NAD1C. | 463 | 6e-046 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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