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Information for unigene UN07406

FASTA Sequence
Unigene ID: UN07406Length: 1012 SSR 
GCGAATTCTTCCGATCCGCCTGCTACCTTTAAAGAGGTCGTCCTCCTGGCTCCGGTAAGAAGCAGCCCTATGCTTTAGGAGGAACA
GGTGGAGTTGGGTTTACACCTCATGTCATTGAGGTCAAAACTGGAGAGGACATAGCTATGAAGGTAGTGGCGTTCACGCAACAGGG
GCCACGCGCGATCTGTATTCTCTCAGCTACAGGAGCCGTGTCTACTGTGATGCTTCGTCAAGGGAACAATCCTAATGGAACTGTTA
AGTTTGAGGGTCCATATGAGATCATTTCCATGTCAGGTTCTTTCTTGAATACTGAGAGTAATGGAACTGTGACCAAAACCGGTAGC
TTAAGTGTATCTCTGGCTAGACCAGATGGTCAGGTTGTGGGTGGTTGTGTTGCTGGAATGCTTGTAGCTGGATCACAAGTCCAGGT
TGTTGTTGGAAGCTTTGTACCAGATGGGAAGAAACAGAAACAAAGCGCAGGGCGTGTTCAGAATACTCCCGAGCCAGCTTCTGCAC
CAGCCAATATGTTGACCTTTGGTGGTGGTGGAGGAGGAGGACAAGGAAGCCCTAGGTCTCAGGGACAGCAACATTCAAGCGAGTCA
TCAGAGGAAAACGAAAGTAACTCTCCTTTGCACCGTGGTAATAACAACAACAACAACAATCATCATGGACTGTTTGGAAACTCGAC
ACCGCAACAACTTCACCAAATGCCACCTATGCAGCAGCAGCAGATGTACCATCACCACCTCTGGCCTGGCCACAATCCTCAATAAG
CCAGATGGTCCGTGGTGGCTCGTGCTGGCCGGGTTTGCTTCTCTGTTCGTTTTACACATCTCTCCAACCAGAATTATCCATAAAGT
AGATTGAGCTTTCTTTACTCTCTCGTCTTCTTCTTCCTCCTCCTACTTCTCCACAATCTAATTTTGGTTTTAGATAAACAGAGAGA
TGTTAAGTAGGTTTCAGTTCATCATTTTTAGTTTGTTTCTCTTAGTTACTTTTGATTGTGGTGATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002868028 hypothetical protein ARALYDRAFT_914905 [Arabidopsis lyrata subsp. lyrata]10121e-107
NP_567546 AT hook motif DNA-binding family protein [Arabidopsis thaliana]9806e-104
CAA11837 AT-hook protein 2 [Arabidopsis thaliana]9743e-103
CAA17138 putative protein [Arabidopsis thaliana]7843e-081
XP_002865172 hypothetical protein ARALYDRAFT_494313 [Arabidopsis lyrata subsp. lyrata]5764e-057

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q940I0 AT-hook motif nuclear localized protein 139804e-104
O49350 AT-hook protein 29742e-103
O49694 Putative uncharacterized protein AT4g179507842e-081
Q9FIR1 AT-hook motif nuclear localized protein 85655e-056
B9S1G5 DNA binding protein, putative5494e-054

Arabidopsis top hits (Blast detail)Scoree value
AT4G17950.1 DNA-binding family protein9937e-108
AT5G46640.1 DNA-binding family protein5653e-058
AT2G33620.1 DNA-binding family protein / AT-hook protein 1 (AHP1)4703e-047
AT2G33620.2 DNA-binding family protein / AT-hook protein 1 (AHP1)4703e-047
AT2G33620.3 DNA-binding family protein / AT-hook protein 1 (AHP1)4703e-047

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
201  17%
 
125  83%

Unigene MembersMember information