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Information for unigene UN07430
| FASTA Sequence |
| Unigene ID: UN07430 | Length: 1291 |
SSR | | CTTCTTCCGTGGTTCATTAAACCGTGCGGTTGAATCATAACGACTTTCCGTTGGATCTGAATCTCTCTTTTTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTTTCTCAATATGAACGATTTATTTTCAAGCTCGTTCACTCGCTTCCGCAGCAGCAAAGAACCATCTCCTCA
AGGCACCACCGGAGTTCAGATGGCGCATCCGGCGGGAGTGAACCTCGACAAGTTCTTCGAAGACGTGGAGTCCGTGAAAGAAGAGT
TGAAGGAGCTAGATGGTCTCAACGACACGCTCCGATCCTCTCACGAGCAGAGCAAGACGCTTCACCATGCTCAAGCCGTCAAGGAT
CTCCGCTCCAAGATGGACGCTGACGTCGGAGTAGCTCTGAAGAAGGCCAAGATGATCAAGGTTAAACTCGAGGCGCTTGATCGATC
CAACGCTGCTAACCGGAGCCTCCCTGGCTGTGGACCTGGATCCTCCTCGGATCGTACCAGGACGTCTGTTCTCAATGGTTTGAGGA
AGAAGTTGAAGGACTCCATGGACAGTTTCAACCGCTTGAGGGAGCTTGTCTCGTCTGAGTATAGAGAAACTGTACAGAGGAGGTAC
TTCACCGTCACCGGAGAGAATCCTGACGAGAAAACTTTGGATCGTCTCATTTCTACAGGAGAAAGTGAGAGGTTCTTGCAGAAAGC
AATACAAGAACAAGGAAGAGGAAGGGTCTTAGACACCATTAACGAGATCCAAGAAAGGCATGATGCGGTTAAAGACATTGAGAAGA
ATCTCAGGGAGCTTCACCAAGTGTTTCTAGACATGGCCGTGCTGGTCGAGCACCAGGGAGCTCAGTTAGATGACATCGAGAGCCAC
GTGGGACGAGCTAGCTCCTTCATCCGAGGTGGAACAGAGGAGCTACATACCGCTCGGGTTTACCAGAAGAACACCCGTAAATGGAC
ATGTATCGCCATTATCATTCTCATCATCATTATAATTGTTGTGGTTCTTGCTGTTGTTAAACCATGGCAGAACAACGGAGGTGGTG
GCGGCGGTGGTGGAGGAGGAAGTCAGGCAGCTCAAGGTCAATTGCCACCACCAAGTCCTCCTCAGGCAAGGCGTCTTCTGTTACGT
TGAAGTGAGTTTTGTAGTTTGCAAATATATTCTTTCTTTGTAAACCCTTTCATCAAACCAGCATTGTGTTTCTACTTATTACTGCC
GAGTTTTCTTGTGAACCACCTTTTTATTTGATTTTTTCTTGGGAAATATCAAATATTTGGGTTAAATAAGAAATCAAGTAATTATC
T
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34618 unnamed protein product [Thellungiella halophila] | 1494 | 2e-163 |
| XP_002884867 SYP121 [Arabidopsis lyrata subsp. lyrata] | 1458 | 3e-159 |
| NP_187788 syntaxin-121 [Arabidopsis thaliana] | 1402 | 1e-152 |
| NP_974288 syntaxin-121 [Arabidopsis thaliana] | 1384 | 1e-150 |
| XP_002524068 syntaxin, putative [Ricinus communis] | 1225 | 3e-132 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q3E7R5 Putative uncharacterized protein At3g11820.2 | 1384 | 8e-151 |
| B9SDJ9 Syntaxin, putative | 1225 | 2e-132 |
| B9H9L1 Predicted protein | 1175 | 1e-126 |
| B9IIJ7 Predicted protein | 1123 | 1e-120 |
| B7FI20 Putative uncharacterized protein | 1115 | 1e-119 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G11820.1 SYP121 (SYNTAXIN OF PLANTS 121); SNAP receptor/ protein anchor | 1402 | 4e-155 |
| AT3G11820.2 SYP121 (SYNTAXIN OF PLANTS 121); SNAP receptor/ protein anchor | 1384 | 4e-153 |
| AT3G52400.1 SYP122 (SYNTAXIN OF PLANTS 122); SNAP receptor | 1079 | 1e-117 |
| AT1G61290.1 SYP124 (SYNTAXIN OF PLANTS 124); SNAP receptor | 910 | 4e-098 |
| AT1G11250.1 SYP125 (SYNTAXIN OF PLANTS 125); SNAP receptor | 909 | 5e-098 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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