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Information for unigene UN07443

FASTA Sequence
Unigene ID: UN07443Length: 804 SSR 
GTGTATGATACTTTGAGAGAAATTCGAATGCTCTGTTTTGTTTTCTCCGGAAAGTTATATAAGATCAGAGGAAGATGAGAGGCGGC
GCGAGTGGAAACAACGTTTTGGAGATTATAAACGCAGCCGCTACTGCGTTCGCTTCCTCTGATGATCGTATTCATCACCAACCTTC
CCCGATTCATGTGAGTCCCTATTTCATCGGATTTAGCTCATTTTTTCGACGTTTTAATGATCATCGAGAGAACTGTATAATCATTT
CGTTATCGCAAAAGCATTAGATCGAACAGTTTGTAGGCGAACTCCATAGCTACGTTCCTCTATTGACTCATTCACAATAGATTCTA
ATTTGTTTATGTGACTTCAATCGAAAAAAAAAATTTGAATAGCAGAAGAAGCGAAGATGGTGGAATCGTTTCATATGTTTCAGACC
TTCAACACAGAGAAAAAAACGAATAGGGAAAGCTGCTCTTGCTCCTGAACCGGTTCCTACCGATTCCACATCCAATTCCGGTTATC
GCTCGGTTATGACGGCTCTTCCTTTCATAGCCCCACCTTCTTCTCCAGCTTCCTTCTTCCAATCAGAACCTCCTTCCGCTACGCAA
TCGCCTGTAGGGATCCTCTCCTTTAGTCCTCTACCTTCTAACAACCACAACAACAACAACAACAGCGAAGAGCGTCCTTCGATCTT
CGCCATTGGACCTTACGCTCACGAACCTCAGCTGGTTTCTCCTCCGGTTTTCTCTACTTACACAACCGAACCGTCTTCGGCTCCGG
TCACGCCGCCTCTCGACGAGTCTTTCTACT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAZ40337 hypothetical protein [Raphanus sativus]6273e-063
CAZ44327 hypothetical protein [Raphanus sativus]6141e-061
ABJ98061 unknown [Eutrema halophilum]5441e-053
XP_002886388 hypothetical protein ARALYDRAFT_474978 [Arabidopsis lyrata subsp. lyrata]5306e-052
NP_564816 uncharacterized protein [Arabidopsis thaliana]5127e-050

Swiss-Prot top hits (Blast detail)Scoree value
Q9SRE5 Uncharacterized protein At1g766602302e-018

TrEMBL top hits (Blast detail)Scoree value
C4WRH4 Putative uncharacterized protein6272e-063
D0R6K0 Putative uncharacterized protein l7rfog36147e-062
A0FIZ9 Putative uncharacterized protein5441e-053
Q93W23 At1g63720/F24D7_95125e-050
Q9CAD7 Putative uncharacterized protein F24D7.94302e-040

Arabidopsis top hits (Blast detail)Scoree value
AT1G63720.1 EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G52430.1); Has 406 Blast hits to 313 proteins in 78 species: Archae - 0; Bacteria - 2; Metazoa - 123; Fungi - 81; Plants - 111; Viruses - 14; Other Eukaryotes - 75 (source: NCBI BLink).5123e-052
AT5G52430.1 hydroxyproline-rich glycoprotein family protein3035e-028
AT1G76660.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G52430.1); Has 280 Blast hits to 160 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 55; Fungi - 17; Plants - 64; Viruses - 4; Other Eukaryotes - 136 (source: NCBI BLink).2302e-019
AT4G25620.1 hydroxyproline-rich glycoprotein family protein1701e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
123  75%
 
211  25%

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