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Information for unigene UN07449
| FASTA Sequence |
| Unigene ID: UN07449 | Length: 1586 |
SSR | | TTTCTCTCTCTAAGCTCTCTTCGTTTCTATCTCTTCCTATTCGGGTTTCAGATCCGAGTTCGGAAGATTACAAAAGTACTCGAAAG
TCTTTCACTTTTGCTCTTAAAGCTCTCACCTCTCTCTCTCCGACACAACTCGAAACTCAAGTCATGGCAGGATCAGCACCAGAAGG
TACACAGTTTGATACTCGTCAGTTTGACCAGAAGCTCAATGATGTCCTCGAGGGACAAGATGAGTTCTTCACCTCGTATGATGAGG
TCCATGAGAGCTTTGATGCCATGGGTCTTCAAGAGAACCTTCTTAGGGGCATCTATGCCTATGGTTTTGAGAAGCCCTCTGCTATT
CAGCAAAGAGGAATCGTACCTTTTTGCAACGGTCTTGATGTGATCCAGCAGGCACAGTCTGGAACCGGCAAAACAGCCACTTTCTG
CTCTGGTGTCTTGCAGCAGCTCGACTTCACCCTCGTCCAGTGCCAGGCTCTCGTCTTGGCTCCCACCAGGGAGCTCGCTCAGCAGA
TTGAGAAGGTCATGCGTGCTCTCGGAGACTACCTTGGCGTCAAGGTCCACGCCTGTGTCGGTGGAACCAGTGTCCGCGAGGATCAG
CGCATCCTCCAGGCTGGTGTTCATGTCGTCGTTGGAACTCCTGGTCGTGTCTTCGACATGCTCAGAAGACAGTCACTTCGTTCTGA
CTCCATCAAGATGTTTGTCCTTGACGAAGCTGATGAGATGCTCTCTCGTGGTTTCAAGGACCAGATCTACGACATCTTCCAGCTCC
TCCCACCGAAGATTCAGGTCGGTGTCTTCTCAGCTACAATGCCACCTGAAGCTCTTGAGATCACGAGGAAGTTCATGAGCAAACCG
GTGAGAATCTTGGTGAAGCGTGACGAGCTGACTCTTTGAGGTATCAAGCAGTTCTACGTGAACGTGGAGAAGGAAGACTGGAAGCT
GGAGACTCTCTGTGATCTCTACGAGACTCTAGCCATCACTCAGAGTGTCATCTTCGTCAACACACGTCGCAAGGTGGACTGGCTCA
CTGACAAGATGAGGAGCCGTGACCATACCGTCTCAGCTACTCACGGAGACATGGACCAGAACACGAGAGACATCATCATGAGAGAG
TTCAGGTCTGGTTCGTCGCGTGTTCTCATCACGACCGATCTCTTGGCTCGTGGTATCGATGTGCAGCAAGTGTCTCTGGTCATCAA
CTTTGACTTGCCGACTCAGCCTGAGAACTACCTTCACCGTATCGGTAGAAGTGGGAGGTTTGGGAGGAAAGGTGTGGCGATTAACT
TTGTGACCAAGGATGATGAGAGGATGCTTTTTGATATCCAGAAGTTCTACAATGTTGTTGTTGAGGAGCTTCCATCAAACGTAGCC
GATCTTCTTTGAAGAAGGAAGAAGAAAGGAAAGGTTGCTTGGTTTGCAAGTTTCTTATTTGATTTTTGACCTATCTCTCTCTCTCT
TTCTGAATTATCTCGAGACCAGTTTTTTTCTTTTTTTCTAGTATTCAACCAACTCTTTCGAACATATGTTGTTTCTTCTGACCCTG
TTTCTTTTTAATCTCATGCAATGTTTATCTAATTTTCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002884997 predicted protein [Arabidopsis lyrata subsp. lyrata] | 2057 | 1e-228 |
| NP_566469 translational initiation factor 4A-1 [Arabidopsis thaliana] | 2056 | 2e-228 |
| AAL91176 eukaryotic translation initiation factor [Arabidopsis thaliana] | 2053 | 4e-228 |
| AAM63951 Eukaryotic initiation factor 4A, putative [Arabidopsis thaliana] | 2051 | 7e-228 |
| XP_002891805 predicted protein [Arabidopsis lyrata subsp. lyrata] | 2050 | 9e-228 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P41376 Eukaryotic initiation factor 4A-1 | 2056 | 8e-230 |
| P41377 Eukaryotic initiation factor 4A-2 | 2042 | 3e-228 |
| P41379 Eukaryotic initiation factor 4A-2 | 1972 | 4e-220 |
| Q40467 Eukaryotic initiation factor 4A-14 | 1968 | 1e-219 |
| Q40465 Eukaryotic initiation factor 4A-11 | 1961 | 8e-219 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9S5V7 Dead box ATP-dependent RNA helicase, putative | 1956 | 5e-217 |
| A9PD17 Predicted protein | 1954 | 9e-217 |
| B9HDC5 Predicted protein | 1952 | 1e-216 |
| A9P851 Predicted protein | 1951 | 2e-216 |
| D2X5K2 DEAD-box RNA helicase-like protein | 1950 | 2e-216 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G13920.1 EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation initiation factor | 2057 | 5e-231 |
| AT1G54270.1 EIF4A-2; ATP-dependent helicase/ translation initiation factor | 2043 | 2e-229 |
| AT3G13920.2 EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation initiation factor | 1946 | 4e-218 |
| AT3G13920.3 EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation initiation factor | 1946 | 4e-218 |
| AT1G72730.1 eukaryotic translation initiation factor 4A, putative / eIF-4A, putative | 1903 | 4e-213 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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