RadishBase

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Information for unigene UN07452

FASTA Sequence

Unigene ID: UN07452	Length: 1185	SSR
TATCTATCTCTCTCTCTCTCTCTCTTTCTAGAGCTGGAGTGAACTGTTGAGCCCTTTGGTTTCATCGAGAGACCCCTAAAACCCGA TCTAGGTGAAGAATGGCGTCTTCTTCTTCCTTCTCCCTCACCTCTCCGGCTGCTTCCGTCTATGGAGGAGCCACTCAAACCTCGTC GCAGTTACCTCTCCCAACCACTCGCTCTCGTCTCCCTCGCAGAGTTTCCTTCCGTCTCTCCTCCGCCAAGCCTAAGCTTCGCTTTC TCTCCAAGCCTACTCGCAGTAGCTACCCTGTGGTGAAAGCCCTATCTAACCAGGTTGGTGGAGGTGCATCATCAAATGCTTCAGCT CCTGCAGGACCCTCAGCTGAAGGAAAGGATACAAACTCATCAAAAGACTCTTCTTCACCTGATTTAGCTACAGAGGAGTCTATCTC TGAGTTCCTGACCCAAGTCACAACTCTTGTCAAGCTTGTGGATTCTAGAGACATCGTCGAGTTGCAGCTGAAACAACTCGACTGTG AACTTCTCATCCGGAAAAAGGAAGCCTTACCTCAGGCCCAAGCCCCTGCGCCTTATGTTATGATGCAGCAACCAAACCAACCATCT TATGTGCAAGCAACGGCTCCTGCTGCCTCACCTCCACCTTCTTCTACTCCAGCCTCTTTGCCCGCACCATCCTCACCCAGTCCAGC GAAATCATCGCTTCCAACTGTTAAAAGTCCCATGGCAGGCACATTCTACCGCAGTCCAGGACCTGGTGAACCACCTTTTATCAAGG TTGGCGATAAAGTGCAGAAGGGACAAGTTCTATGCATCGTCGAAGCCATGAAGTTAATGAATGAAATAGAGTCTGATCAAACGGGA ACCGTAGTGGATATCGTTGCAGAAGACGGCAAGCCTGTTAGCCTCGACACTCCTCTGTTTGTGGTTCAACCGTAGAAGCGGCACCA TGAGAAACGGAGAAAAAGGGCTACAATTAATTCGATCTATGTGCTTTGGTAATACTGTTTTCTTGAGTCTTTAAGAATGTGTCGTC CTCATTGTTACTGTCAGACTCTGTTAGGTCTTTTTAGTTGGTGAGGAGGAAGAAAAGAGTTTTTTTTTAGTTTCTATTTAAAGATA GAAGTTGAGAGCTCTGTCTTATTCATTTCCTCTTATACTATACACGCATTCTTGGTTCTGTTCTGTT

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
XP_002873773 BCCP/BCCP-1/BCCP1/CAC1-A/CAC1A [Arabidopsis lyrata subsp. lyrata]	1065	1e-113
NP_197143 biotin carboxyl carrier protein of acetyl-CoA carboxylase 1 [Arabidopsis thaliana]	1055	1e-112
AAC49114 acetyl-CoA carboxylase biotin-containing subunit [Arabidopsis thaliana]	1055	1e-112
2208465A Ac-CoA carboxylase	1046	2e-111
AAB51193 acetyl-CoA carboxylase biotin-containing subunit [Arabidopsis thaliana]	983	3e-104

Swiss-Prot top hits (Blast detail)	Score	e value
Q42533 Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic	1055	6e-114
Q42783 Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic	616	5e-063
Q9LLC1 Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic	569	1e-057
P43874 Biotin carboxyl carrier protein of acetyl-CoA carboxylase	278	8e-024
P37799 Biotin carboxyl carrier protein of acetyl-CoA carboxylase	275	2e-023

TrEMBL top hits (Blast detail)	Score	e value
Q3E9G9 Putative uncharacterized protein At5g16390.2	914	2e-096
Q39346 Biotin carboxyl carrier protein (Fragment)	738	6e-076
A8RWF8 Biotin carboxyl carrier protein subunit	702	9e-072
C0LLW0 Acetyl-coenzyme A carboxylase (Fragment)	678	5e-069
B9IQ25 Predicted protein	677	7e-069

Arabidopsis top hits (Blast detail)	Score	e value
AT5G16390.1 CAC1 (CHLOROPLASTIC ACETYLCOENZYME A CARBOXYLASE 1); acetyl-CoA carboxylase/ biotin binding	1056	4e-115
AT5G16390.2 CAC1 (CHLOROPLASTIC ACETYLCOENZYME A CARBOXYLASE 1); acetyl-CoA carboxylase/ biotin binding	914	1e-098
AT5G15530.1 BCCP2 (BIOTIN CARBOXYL CARRIER PROTEIN 2); biotin binding	570	1e-058
AT3G15690.2 biotin carboxyl carrier protein of acetyl-CoA carboxylase-related	163	2e-011
AT3G15690.1 biotin carboxyl carrier protein of acetyl-CoA carboxylase-related	154	2e-010

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


8	1			33%


21	1			33%


20	1			33%

Unigene Members	Member information