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Information for unigene UN07455

FASTA Sequence
Unigene ID: UN07455Length: 871 SSR 
GACAGATCCCTGTACTAAAATTTGGAATCTCTGTTTTTTGTGCTCCGTCACCGTGAAATGTATCATCCACTACCTATCCCTCCCTC
CTCCTCCTCCTTCTCCTCCTCATCCGATGACGTTTCCTCGCCGCTTCTGAATCGAAACCGCCGCGTTTCTCAGCCGCTACGCGGCG
CGGCGTCGCGGCTTCTCCGGCGAGCGAGCAGCCACCACATGATGCTCCGCGAGTCGTCGGTCCGAGTCCGCGAGACGGCGGCGGAG
CAGATCGAGGAGAGGCAGAGCGAGTGGGCGTACTCGAAGCCGGTCATAGTCTTGGACGTGCTGTGGAATCTAGCGTTCGTGTTCGT
CACCGTCGGAGTCGTGTGGTTTAGCTCCGGAGAAGATCCTCACGTTCCTCTGAGGTTCTGGATCGCAGGGTATAATCTACAGTGCT
TGATTCACGTCGTGTGTGTGGTCGCTGAGTATCGCCGCCGACGACAGGGTTATGATCATCGTCTGAACCGAGATTCAGATTCCGGT
TTAGCCTCCTCCAGTGAAGGATCTAGTGAAGAGGAATCTGTTGGTCCTGAGATTGAATCTGGAACTAGTCTTGCTAAGCACCTTGA
ATCGACGAATGCAATCTTCTCCTTTGTGTGGTGGATCATTGGGTTTTATTGGGTCACTGCTGATGCGGAGGGACTCGCTCGAAGCT
CGCCTCAGCTCTACTGGCTCTGTGTGGCGTTTCTCGCCTTTGATGTTATCTTTGTAGTCCTATGCGTTGCGGTTGCTTGTCTTATT
GGTATTGCTGTTTGCTGCTGTTTGCCTTGCATCATCGCGGTTCTGTACGCTTTGGCTGATCGGGAAGGCGCATCTGATGAGGAGAT
TGAAGGCTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ADK63418 C3HC4 type zinc finger protein [Brassica rapa]11176e-120
XP_002880197 hypothetical protein ARALYDRAFT_322232 [Arabidopsis lyrata subsp. lyrata]10532e-112
ADK63393 C3HC4 type zinc finger protein [Brassica rapa]9393e-099
XP_002876598 hypothetical protein ARALYDRAFT_486593 [Arabidopsis lyrata subsp. lyrata]9152e-096
NP_567110 RING/U-box domain-containing protein [Arabidopsis thaliana]9123e-096

Swiss-Prot top hits (Blast detail)Scoree value
Q93Z92 E3 ubiquitin-protein ligase At4g116807241e-075
Q8LDB8 E3 ubiquitin-protein ligase At1g631704067e-039
Q9LN71 E3 ubiquitin-protein ligase At1g127604041e-038

TrEMBL top hits (Blast detail)Scoree value
Q93YQ5 Putative uncharacterized protein At3g61180; T20K12.809122e-096
Q9M2E6 Putative uncharacterized protein T20K12.808962e-094
B9RDL6 Cleavage and polyadenylation specificity factor, putative8056e-084
B9RC56 Cleavage and polyadenylation specificity factor, putative7715e-080
B4F9U4 Putative uncharacterized protein7251e-074

Arabidopsis top hits (Blast detail)Scoree value
AT3G61180.1 zinc finger (C3HC4-type RING finger) family protein9121e-098
AT4G11680.1 zinc finger (C3HC4-type RING finger) family protein7249e-077
AT1G68070.1 zinc finger (C3HC4-type RING finger) family protein5903e-061
AT2G01735.1 RIE1 (RING-FINGER PROTEIN FOR EMBRYOGENESIS); protein binding / zinc ion binding5383e-055
AT1G63170.1 zinc finger (C3HC4-type RING finger) family protein4067e-040

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
214  67%
 
192  33%

Unigene MembersMember information