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Information for unigene UN07475

FASTA Sequence
Unigene ID: UN07475Length: 1597 SSR 
TGTCTCCAGCAAGAGAATATGTTGGAGTCAGAAAGCAATCAAAACCCTTTTGATCACGTTCCAAGTAATATTATCGGGCCTGTTCC
TCCAGCTCCTGGGAGCCAGCATCCACAGTTTACGAATGCTGACCCTCAAGCACGTGATGCCCTTCGTATCCCTAACTTTGTGGTTC
CGCAACCATTTGATACGGCGAGTTACTATGCTCAGTTCTACCGATCAGGCCCTGACAGTGATGGCCGTGTTTCTCCCTTTGTTTCT
CCAGGGGTTGCATCCAAGTTTAATGGAAATGTTACAGTATTGCCCCCTCATTCGTCTCAAACCATGCAAGAGGGTGGAAACAACTT
AGTTCTGTCGACTGCTAGTCCAACTCCACTGGTAACACAGCCTGCTGGGCTAATGCAGAACTCTATACCTGTCACGCAGCAGCCTG
TTCCTTTCTTACGCCCCCCAGGGTTACACATGTCACATTATCCACCGAATTACATGCCATATGGACACTACTTCTCCCCATTCTAT
CTACCTCACCCGGCAATGCAACAGTTCTTAAGCAATGGTGCATTTGCTTAAGAACCTCAGGCAAGCAGTGTGTATCCTGCTGCTCC
TCCACCCCCTGGAGCTGCAACGGGAGGCAAATACACACTCCCTCATTACAAGCCTGGGAATAATACAAATCATGTTGGTATGCCTG
GTGGTTACGGACCATCACATGGTTCCTTCCCAGCAGGATATAATTCCAATTCTGCTGCTTCAGCTGGGAATTCAACTTCCAATGAG
GATCTCAGCACATTGCAGTTGAAGGAGAACAACGGCTACAGCACAACAGGGCAACAGAGTGAAGCATTACCTGTTTGGATTGCTGG
ACCAGGACGAGATATGCCGAGCCCTTTCTACGGTTTACAGCACCATGGTCAACACGTGACTTACGCTCCAGCACAAGCCGGTCACG
TGGCGTTCCCAGGTATGTATCATCCGGGACAAGCAGCAGTGGCAGCAGCAGGAGTTCACCATCCGCTCTTGCAACAGTCTCAGGGT
GTTGCTGGAGCTGATATGGTTGCACCTGGGCCTAACGTCTTTCAACAGCCTCAGCAAACACCGATGAATTGGCCAAGTAATTACTG
AAACAGGAAGGAAAAGAAGATTTTGGAGGGATTGAACCAGATTATCAGGAAGATACGGTGCGGGTTTTTCGTTGACTGGGGTGTGT
GTGTGTATGCCATCCAACAAATTACCGAAGAAAGGAAACTATGAAGTTGAGCATGAAGGGATTGACACAGGATGATCATAAAGGAT
AGGGGAAGAAGGTATTGCTTATTGAATCTAGTTTTTTTTTTGGTGTTTCTATATCTTTTCATTTTTTGGGTTTTAGCAAAATATTT
GCTTTTTTTAGTTATTTTTAGCTTTTTTGAGCTAAGCCAACAGAACTTTTGCTACCTGAGTCTGTATTTGAAGACTCTTCCTTCTT
TTGTCAGCCTTTTGTGAGAACATGTTCAATATGGAGTTAACCTGAATTTTTTTTATTTGATATTCAAAATACAAGAAAATATATAG
AATGTAATAGTCTTCCTGAATATTCAAATATTATTGAAGTGTTTTCTTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884662 hypothetical protein ARALYDRAFT_896937 [Arabidopsis lyrata subsp. lyrata]17131e-188
NP_187423 uncharacterized protein [Arabidopsis thaliana]16852e-185
AAF13084 unknown protein [Arabidopsis thaliana]16852e-185
XP_002532215 conserved hypothetical protein [Ricinus communis]11288e-121
XP_002267265 PREDICTED: hypothetical protein [Vitis vinifera]11261e-120

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q0WUY5 Putative uncharacterized protein At3g0766016851e-185
Q9SSE4 MLP3.11 protein16851e-185
B9T1U6 Putative uncharacterized protein11285e-121
B9IAV3 Predicted protein7324e-075
B8BDH5 Putative uncharacterized protein6232e-062

Arabidopsis top hits (Blast detail)Scoree value
AT3G07660.1 unknown protein16865e-188
AT1G55820.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1296 (InterPro:IPR009719); BEST Arabidopsis thaliana protein match is: GIP1 (GBF-INTERACTING PROTEIN 1); unfolded protein binding (TAIR:AT3G13222.1); Has 1009 Blast hits to 462 proteins in 111 species: Archae - 0; Bacteria - 42; Metazoa - 245; Fungi - 90; Plants - 135; Viruses - 12; Other Eukaryotes - 485 (source: NCBI BLink).2313e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
211  33%
 
82  67%

Unigene MembersMember information