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Information for unigene UN07477

FASTA Sequence
Unigene ID: UN07477Length: 1101 SSR 
ACCATCTATAAACTGTCTTTTCCGCAGGATTCTTGTGTTCCCTTTTAGGATTTTGCAAGAAAAAAACAATGCTGAAACCAATCCTT
GTGTTTTTAGATCTAAAGAGTAAGCAACAAAGGGTGGTACACACATATACATATATAGAGAGAGACCTTTAAGTCGAAGAAGAAGC
AGCAGATGAATCAGTCAAGGCGGTGTTGGTGTTGTTGATAGTACTTCTTTTCTTCCTCTCTTCCTCATACTCAGCATCATCAGTCA
TCAGCTGGAACCTACAAACAGGACAAGAGTTCCTCGTCCCTAGCCACGGTAAAATACAATTACCGTGGTAACAATGTCCACACGGT
AACTTCTTAACGGTTTCACCAACCACCATCCCATCTTTACACACAGCACAAACCATCTTATCATCAGAACCACAAACCTCGAAAGT
CTCTAACGCCTCGATCGCCGATTTAGCAGCCGGCGGCGCTCCTCTCCTTCCACCACCACCACCACCACCGCCGCCGTCTCCTTCCG
CTAAATTCTGGAGAAGCGCCTCGTAACCAGCTCCGTCGTCCACGTAATCAGCCGCGTTTCCTGAATTGTCTTCGATTCCCATTAGA
ATCTCGGCCCAATCGAGAATCCGGTTACGTCCGGTTATCGATCGCGTCGTTATCGGAAACATCTCCTCTCCTCGATCCTCCTCTTC
TTCTTCTTCTTCATCCTCCTCATCCCCCTCATCCCCCTCCTCCTCATCGTCGATTTCGTTTCGGCTATTAAGCTCCAATCCGAAGA
ACTCGTCCTCGTACGACAACACGTCGAGACGCGGCGGCGACGGCGCGTGGGTCAAGAGGCGGAGCATCTGGAGGAAATGCGAGCCG
ATGGTCGAGTCTTCTACCCTCAGATCTGGGGAGAGCGGCGGCGAGCGTGGGATCGGCTGGATCGATTCGACGAAGCCTTTGTTACA
TTCGGAGCAGACGACGAATGATTCGCCGTGTAGAGTTTCGACGACGACGCGCTTGTTGCAGTGGTAGCACCAGTGCGGATCCGACG
GGGCGTCGTCGGACATCGTGTTTCCCGTCGGGTTGTCGGGTCTCGATTCAGATCCGATTGAGAAAAACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_201297 E3 ubiquitin-protein ligase CIP8 [Arabidopsis thaliana]5721e-056
XP_002866641 hypothetical protein ARALYDRAFT_496711 [Arabidopsis lyrata subsp. lyrata]5622e-055
XP_002510553 zinc finger protein, putative [Ricinus communis]5155e-050
XP_002273623 PREDICTED: hypothetical protein [Vitis vinifera]4162e-038
XP_002991361 hypothetical protein SELMODRAFT_429694 [Selaginella moellendorffii]3491e-030

Swiss-Prot top hits (Blast detail)Scoree value
Q9SPL2 E3 ubiquitin-protein ligase CIP811041e-119
Q5M974 E3 ubiquitin-protein ligase RNF1812213e-017
Q3T0W3 E3 ubiquitin-protein ligase RNF1812187e-017
Q6AXU4 E3 ubiquitin-protein ligase RNF1812187e-017
Q9CY62 E3 ubiquitin-protein ligase RNF1812179e-017

TrEMBL top hits (Blast detail)Scoree value
A6XFC3 COP1-interacting protein 85729e-057
B9R8B0 Zinc finger protein, putative5154e-050
A5BX64 Putative uncharacterized protein4161e-038
C0PSK8 Putative uncharacterized protein2994e-025
C7DUY8 Zinc finger protein2969e-025

Arabidopsis top hits (Blast detail)Scoree value
AT5G64920.1 CIP8 (COP1-INTERACTING PROTEIN 8); protein binding / zinc ion binding8252e-088
AT3G02340.1 zinc finger (C3HC4-type RING finger) family protein2761e-024
AT5G15820.1 zinc finger (C3HC4-type RING finger) family protein2662e-023
AT3G19950.1 zinc finger (C3HC4-type RING finger) family protein2643e-023
AT5G01980.1 zinc finger (C3HC4-type RING finger) family protein2643e-023

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
203  27%
 
214  36%
 
194  36%

Unigene MembersMember information