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Information for unigene UN07477
| FASTA Sequence |
| Unigene ID: UN07477 | Length: 1101 |
SSR | | ACCATCTATAAACTGTCTTTTCCGCAGGATTCTTGTGTTCCCTTTTAGGATTTTGCAAGAAAAAAACAATGCTGAAACCAATCCTT
GTGTTTTTAGATCTAAAGAGTAAGCAACAAAGGGTGGTACACACATATACATATATAGAGAGAGACCTTTAAGTCGAAGAAGAAGC
AGCAGATGAATCAGTCAAGGCGGTGTTGGTGTTGTTGATAGTACTTCTTTTCTTCCTCTCTTCCTCATACTCAGCATCATCAGTCA
TCAGCTGGAACCTACAAACAGGACAAGAGTTCCTCGTCCCTAGCCACGGTAAAATACAATTACCGTGGTAACAATGTCCACACGGT
AACTTCTTAACGGTTTCACCAACCACCATCCCATCTTTACACACAGCACAAACCATCTTATCATCAGAACCACAAACCTCGAAAGT
CTCTAACGCCTCGATCGCCGATTTAGCAGCCGGCGGCGCTCCTCTCCTTCCACCACCACCACCACCACCGCCGCCGTCTCCTTCCG
CTAAATTCTGGAGAAGCGCCTCGTAACCAGCTCCGTCGTCCACGTAATCAGCCGCGTTTCCTGAATTGTCTTCGATTCCCATTAGA
ATCTCGGCCCAATCGAGAATCCGGTTACGTCCGGTTATCGATCGCGTCGTTATCGGAAACATCTCCTCTCCTCGATCCTCCTCTTC
TTCTTCTTCTTCATCCTCCTCATCCCCCTCATCCCCCTCCTCCTCATCGTCGATTTCGTTTCGGCTATTAAGCTCCAATCCGAAGA
ACTCGTCCTCGTACGACAACACGTCGAGACGCGGCGGCGACGGCGCGTGGGTCAAGAGGCGGAGCATCTGGAGGAAATGCGAGCCG
ATGGTCGAGTCTTCTACCCTCAGATCTGGGGAGAGCGGCGGCGAGCGTGGGATCGGCTGGATCGATTCGACGAAGCCTTTGTTACA
TTCGGAGCAGACGACGAATGATTCGCCGTGTAGAGTTTCGACGACGACGCGCTTGTTGCAGTGGTAGCACCAGTGCGGATCCGACG
GGGCGTCGTCGGACATCGTGTTTCCCGTCGGGTTGTCGGGTCTCGATTCAGATCCGATTGAGAAAAACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_201297 E3 ubiquitin-protein ligase CIP8 [Arabidopsis thaliana] | 572 | 1e-056 |
| XP_002866641 hypothetical protein ARALYDRAFT_496711 [Arabidopsis lyrata subsp. lyrata] | 562 | 2e-055 |
| XP_002510553 zinc finger protein, putative [Ricinus communis] | 515 | 5e-050 |
| XP_002273623 PREDICTED: hypothetical protein [Vitis vinifera] | 416 | 2e-038 |
| XP_002991361 hypothetical protein SELMODRAFT_429694 [Selaginella moellendorffii] | 349 | 1e-030 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SPL2 E3 ubiquitin-protein ligase CIP8 | 1104 | 1e-119 |
| Q5M974 E3 ubiquitin-protein ligase RNF181 | 221 | 3e-017 |
| Q3T0W3 E3 ubiquitin-protein ligase RNF181 | 218 | 7e-017 |
| Q6AXU4 E3 ubiquitin-protein ligase RNF181 | 218 | 7e-017 |
| Q9CY62 E3 ubiquitin-protein ligase RNF181 | 217 | 9e-017 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A6XFC3 COP1-interacting protein 8 | 572 | 9e-057 |
| B9R8B0 Zinc finger protein, putative | 515 | 4e-050 |
| A5BX64 Putative uncharacterized protein | 416 | 1e-038 |
| C0PSK8 Putative uncharacterized protein | 299 | 4e-025 |
| C7DUY8 Zinc finger protein | 296 | 9e-025 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G64920.1 CIP8 (COP1-INTERACTING PROTEIN 8); protein binding / zinc ion binding | 825 | 2e-088 |
| AT3G02340.1 zinc finger (C3HC4-type RING finger) family protein | 276 | 1e-024 |
| AT5G15820.1 zinc finger (C3HC4-type RING finger) family protein | 266 | 2e-023 |
| AT3G19950.1 zinc finger (C3HC4-type RING finger) family protein | 264 | 3e-023 |
| AT5G01980.1 zinc finger (C3HC4-type RING finger) family protein | 264 | 3e-023 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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