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Information for unigene UN07478
| FASTA Sequence |
| Unigene ID: UN07478 | Length: 1327 |
SSR | | CAAAACCCAGATCGTAATTGGTGTTCCATCGTACCAGGAAGTATTGGAAAGCTCACAGACTAAGTCCACGCCACCGTACTCTCTTC
AAACCTTCCCAGACTTTCTCTCAAGCTTTCGCTTTCGTCAAATCCTCCGACGTCTACTCTCCTCCTCCTCCTCCGTCGCAGCAGCC
CAGCGCTTCTCAAGTGCCCAGTACAAGCCAAACGCATCAGACCGATGTAGCTTCATCTTCATCTTCTGCTCCTGTAGCTACTACTG
GCTCTCTACCTTCAAACACAACGCAACCACGTAACGCAATTCTCGTTAGCAATAGACAGAAAGGCAACCCGCTTCTTAAACATATC
AGGAACGTGAAATGGGTTTACTCAGATATCATTCCTGACTACTTACTTGGTCAAACCACTTGCGCTCTCTATCTAAGCTTGCGGTA
TCATCTACTCCACCCGGATTATCTCTACTTCCGCATTAGGGAACTACAGAGGAACTTCAAGCTCCGTGTCGTTCTTTGCCACGTCG
ACGTTGAAGATTCGGTGAAACCGTTGCTTGAAGTCACCAAAACCGCTCTCCTCCATGATTGCACCCTATTGTGCGCCTGGAGCTTG
ACGGAATGTGCTCGTTATTTGGAGACGATAAAAGTATATGAAAACAAACCTGCGGATCTCATCCAAGGCCAGATGGATACAGACTA
TCTCTCACGTCTGAACCATTCTCTTACAAGCATCAGACATGTGAATAAGAGCGATGTAGTCACACTTGGTTCTACATTTGGGTCTC
TTGCTCATATAATGGATGCATCCATGGAAGATCTAGCTCGTTGTCCTGGGATTGGCGAACGCAAGGTGAAACGGTTGTACGATACA
TTCCACGAACCTTTCAAGCGTGCAGCTTCGAGCTACCCGTCTGTTATAGAACCAACAGTCCCGCAAACTGAAGTTCACAAGGGTGG
GAACTCGGAGGAACGTGTTGTTGAAGCAGACGAGGATTTTGTGGAGGAAGACTCGAGGAAACGCATGAAGAAGGTAGAGCCTGAGA
AAAATGTGAAGACTGCTCTCTCGACCGTTTTTGCTAGATACTTTGATGGGCTCTGCAAAAAAAAGGAGAAACAAAAGGAGAAAGAT
ACAGCAACAGAGTCAGATGCTGAAGTAACCCACAAAGATTAGCACAAGTTTTGATCACTGGCCAAGGCCATTGCAAGGGTGACTAT
GTTTCTAGAAATGTAACATATTGTTTGGCTTTGTATTTGTTCGTTGGGTATTGTAACTGCTAGTTACTGAAGCCTCTGTATTAATT
TCTTACGATTGTTACTAATTTTGTTTTAGCTTTTACG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_187172 DNA excision repair protein ERCC-1 [Arabidopsis thaliana] | 1520 | 2e-166 |
| XP_002882403 hypothetical protein ARALYDRAFT_477808 [Arabidopsis lyrata subsp. lyrata] | 1518 | 4e-166 |
| CBI36743 unnamed protein product [Vitis vinifera] | 1179 | 7e-127 |
| XP_002281063 PREDICTED: hypothetical protein [Vitis vinifera] | 1169 | 1e-125 |
| XP_002512344 excision repair cross-complementing 1 ercc1, putative [Ricinus communis] | 1143 | 1e-122 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9MA98 DNA excision repair protein ERCC-1 | 1522 | 5e-168 |
| P07992 DNA excision repair protein ERCC-1 | 611 | 2e-062 |
| Q1LZ75 DNA excision repair protein ERCC-1 | 598 | 7e-061 |
| P07903 DNA excision repair protein ERCC-1 | 594 | 2e-060 |
| Q06182 Mating-type switching protein swi10 | 493 | 1e-048 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RF25 Excision repair cross-complementing 1 ercc1, putative | 1143 | 7e-123 |
| B9MZS8 Predicted protein | 1053 | 2e-112 |
| B6UFK1 Mating-type switching protein swi10 | 1011 | 1e-107 |
| Q9FWD8 Putative nucleotide repair protein | 984 | 2e-104 |
| B9G6M8 Putative uncharacterized protein | 981 | 4e-104 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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