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Information for unigene UN07486
| FASTA Sequence |
| Unigene ID: UN07486 | Length: 1292 |
SSR | | TCTGTGGATCTTTTTACCACTACGCTTATGTTGATGAGATCTAAGTTACAGAAACATACCAAAGACAGAGAGAAAACAAGCTCGTG
AGAAGAATCTAAATGAAATTTCATTTATACCATCTTCGGAGCCGTTGTTGTTCTACAGTGAGCTTGGACAGCTGACACCTGTTATC
CAAATTTCATCACTGCAACATACTCAGGCTTTTTTGCTCTTTACTGTTTTCGCTTCAGAAACAAAAGAAACTGTGACGAGAGAGAG
AGAGAGGGAGAGAGAATATTGAATGCTTACTTAGGGCTTAACTGGCTTCATCCGTCTCGCCGGCGACTATCTTGCCGGAAAAGCAT
GAGAGTAGTGTTTCAATGGAGGACGACGACGACATCGAGACACAACAACACCAACAACAACAAACAAGCAGAAAGCTACAGAGACT
CTCCTCCGACAAAACCGAAATGAGGGATTGGAGCGATCCATCGTCGCGTATCATTAGGGTTTCACGAGCTTCCGGTGGCAAAGACC
GACACAGCAAAGTCTTAACATCAAAAGGGTTGAGAGATCGGAGGATACGTCTCTCCGTCGCTACAGCAATCCAGTTCTACGATCTC
CAAGACCGCCTCGGGTTCGATCAGCCGAGCAAAGCCGTCGAGTGGCTTATCAACGCGGCTTCTGATTCGATCTCCGGTTTGGATCC
GATCGACACGAACTTCGACCAGACGCTCTCCCTGTCCAAATCCAGCACATCTGAGAGCTCGTTGTTGTCTTTGTCGAGGACAGAGA
GTCGTGGCAAAGCGAGAGAGAGGACATCGAAAGAGAGACACAAAGACTTGCAAAGCTCCTTCACTCAGCTTCTCACGAGCGGTTTC
GACGAACCGAACCGGAATTGGACCGGTGGTGGTTCTTCTGATTGTTTCAACCCGGTTCAGCTCATGCCAAACTCAAACTCCTTGAA
TCATCATCATAGTCAAAACCAATACTCTTTTGTACCGAACTACAACTTTGGAATCTCTTCTTCTGATTCTCCCGGAGCAACCGGTT
GTTACAGTAGTAGGGGGCCCCTTCAGTCCAATTCACAATCTCTCTTTCTCCACAACAACAACAACAACGTTAATCAGAGATCCATA
TCTTCGTCTTCTTCTTCATCTTCTCCAATGGACAGTCAGAGCATTTCTTTTTTCATGGCTCCGCCTCTCAACCACCATAGTCCTCA
GCTTCCAGAGGCTTTTGACGGCCGGTTATATCTCTACTACGGTGAAGGAAACCGGAGCTCCGACGATAAAGGAAAGGAGAGGAGAT
AG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_564351 transcription factor TCP24 [Arabidopsis thaliana] | 1042 | 5e-111 |
| XP_002893606 hypothetical protein ARALYDRAFT_473241 [Arabidopsis lyrata subsp. lyrata] | 1020 | 2e-108 |
| BAJ34242 unnamed protein product [Thellungiella halophila] | 765 | 7e-079 |
| XP_002867999 hypothetical protein ARALYDRAFT_493022 [Arabidopsis lyrata subsp. lyrata] | 334 | 7e-029 |
| NP_567553 transcription factor TCP2 [Arabidopsis thaliana] | 330 | 2e-028 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9C758 Transcription factor TCP24 | 1104 | 1e-119 |
| Q93V43 Transcription factor TCP2 | 330 | 8e-030 |
| A2XMN1 Transcription factor PCF6 | 293 | 2e-025 |
| Q10CE8 Transcription factor PCF6 | 293 | 2e-025 |
| Q9FME3 Transcription factor TCP5 | 284 | 2e-024 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9S0X3 Putative uncharacterized protein | 329 | 2e-028 |
| Q70MT1 Putative transcription factor | 326 | 4e-028 |
| B9HYW5 Predicted protein | 323 | 9e-028 |
| A0SJS0 TCP family transcription factor | 317 | 4e-027 |
| A2YI86 Putative uncharacterized protein | 316 | 6e-027 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G30210.1 TCP24 (TEOSINTE BRANCHED1, CYCLOIDEA, AND PCF FAMILY 24); transcription factor | 1105 | 1e-120 |
| AT1G30210.2 TCP24 (TEOSINTE BRANCHED1, CYCLOIDEA, AND PCF FAMILY 24); transcription factor | 1105 | 1e-120 |
| AT4G18390.1 TCP family transcription factor, putative | 330 | 7e-031 |
| AT4G18390.2 TCP family transcription factor, putative | 330 | 7e-031 |
| AT5G60970.1 TCP5 (TEOSINTE BRANCHED1, CYCLOIDEA AND PCF TRANSCRIPTION FACTOR 5); transcription factor | 284 | 2e-025 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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