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Information for unigene UN07490
| FASTA Sequence |
| Unigene ID: UN07490 | Length: 1457 |
SSR | | AGTGTAAACTCATATAAAACTTATTTGAATCAAGAACAGATCAGTCCAGAATCCAACAACACAATGTAAAAATGAAAATCTTTCGT
AATCCCCCTCAACATCAATTGTGTAAATTTAGAACTATGAATCCTAATATACGCACTGTGTTGCTCTGATAAAACCCAAAAAAAAT
CGCCATGAGAGCGTCCATGCAATTCCAAAACTCAGGCTTCTTGGTTGTTGTTCTCGACCAGTATCTTCTTGCAAGCTTCATAGCAC
ATGAATGAGATTCCAGCAGCAGGAACCAGCTTCAAGCAACTAGGTCCAAGACCTTTGTACCAACCGAGAATACCTTCGTGCTCAAG
TATGCTCACCAGAGCATCCAACATGTTCTTGTACACAACTCTCCCGCTAACAGCTCCCACCTGCATATGCTTCCGAGCAACCTCCA
GAGGGAAAGTCGCGGTGCTCGATAGCGCACCCGCTAAAGAACCTATCAGAAGAGTCTCAATGTTCCCAATCTTCTCTTGCTTTGAA
AAACTCCTGTATGCTTTCCTTAGGGAGTCGTATGCAAAGTAGTTGGTGGCTGCATATGGAACAACTCCAATAAGACTAGGAGCAAG
ACCCCTGTAGAGTTCTGTGGGTCCTTCCTCGCGTATGATTTTCACAAATGCATCGAATATCCCCTTGTAAACACCTCTCTGAATGG
TAAGACGAGTCTTGACTAGTTCGAGAGGGTAAGTCAAGAGAGTTTGGCTAACTCCAGCACAAGCACCAGCGAGTAATGAAGCTGGG
ATTGGGATTTTGGATTGCTCTCCATGTTCTGGTGACAGTTTCTTGTTCACTGTCTCGAATACAAAAAGCTCGACGGCACGAGCAGG
TGCGACACGAATGACATTGACCAAATTACCCCTGAAGAGACCAGTCCAACCTTCATGCTTCATGATATCACCAAACACTTCCGTGG
ACGAGTTGCCACCACTCCCCACCATCAGATGCGTCCTGATGGTCTCCAAGGGAGCAACCACGGTTCTCGAAACTGCTCCAGCCACA
GCTCCGCTTATTAGCCGCCGCAGTGAAGGATTACCTACCTTAATCTTCAGCTTCAGCCCACCACCACCATTCTTCTTCTTCTTCGT
CTTCTTCTCGCCATTAACTACTTCTTCCCACTCTTCCACTTTCCCATTGAGCTGTGCAGATAAGGTGTGGGAAGGATCCGGAGAAG
AGAGGGATCCGGAACCGAAACCGGATCCCAATGGATTGGTTTGGTTGACGCTGGCGAATAGGGCACCAATTGAGTGGTGGTGGTGG
TGGTGGTTAACGCCGGTTAAGCTCCAATCACATCCCAAATCGGAAACGGAGAAAAGACCGTTCCTTGAATCGTCGAACAGCTGGAT
TCCGGTTTTCCCCATAGCTCTCAGACAATAAATAAGAAGCTTCTGAAGCGGTTAAGTAAAGGAAAGATCTTCACCGCTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002869275 mitochondrial substrate carrier family protein [Arabidopsis lyrata subsp. lyrata] | 1655 | 5e-182 |
| NP_194966 Mitochondrial substrate carrier family protein [Arabidopsis thaliana] | 1645 | 8e-181 |
| XP_002878861 mitochondrial substrate carrier family protein [Arabidopsis lyrata subsp. lyrata] | 1596 | 4e-175 |
| ABA81858 brittle 1 protein-like [Solanum tuberosum] | 1311 | 4e-142 |
| XP_002515534 ADP,ATP carrier protein, putative [Ricinus communis] | 1293 | 5e-140 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P29518 Protein brittle-1, chloroplastic/amyloplastic | 927 | 6e-099 |
| Q5PQ27 Solute carrier family 25 member 42 | 460 | 8e-045 |
| Q05AQ3 Solute carrier family 25 member 42 | 459 | 1e-044 |
| Q0P483 Solute carrier family 25 member 42 | 458 | 1e-044 |
| Q8R0Y8 Solute carrier family 25 member 42 | 440 | 2e-042 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SUV1 AT4g32400/F8B4_100 | 1645 | 5e-181 |
| Q38M74 Brittle 1 protein-like | 1311 | 3e-142 |
| B9RP65 ADP,ATP carrier protein, putative | 1293 | 3e-140 |
| Q9ZNY4 Mitochondrial energy transfer protein | 1271 | 1e-137 |
| A5AV90 Putative uncharacterized protein | 1260 | 2e-136 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G32400.1 SHS1 (SODIUM HYPERSENSITIVE 1); binding / nucleotide transmembrane transporter/ transporter | 1656 | 1e-184 |
| AT5G07320.1 mitochondrial substrate carrier family protein | 400 | 6e-039 |
| AT3G20240.1 mitochondrial substrate carrier family protein | 393 | 4e-038 |
| AT5G01500.1 mitochondrial substrate carrier family protein | 385 | 4e-037 |
| AT2G37890.1 mitochondrial substrate carrier family protein | 377 | 3e-036 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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