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Information for unigene UN07494
| FASTA Sequence |
| Unigene ID: UN07494 | Length: 929 |
| SNP | GGACGAGATACAAAACGGAGTTGTCCGTATATTATATTTTGTAGCGATCAAGAGAGACTAAGGCAGACATGTGAGAGAGGAGAGGA
TCCTATAAACAATTTATTCTAAGATCTCGGCTTCCTCCTTTTCACATATATATTGCATATACACACATATTTCCTCTGCATAGAAG
AGAGTAGAAACCAATCAAGAAAGCTTGATACGAAAGTAAGAGGCTGATAACATCAAGCATAGAAGAAGAATGGATCCGAGGGAAAA
GAAGAGAGGTTCTTTGAAAGAGAAGTTTCAATTGCTTCGTTCAGTCACTAATTCTCATGCAGAAAATGATACATCGATCATAATGG
ATGCATCAAAATATATCAAAAAGCTTAAGAAGAAAGTTGAAAGATTCAAGGAAGACAATACGGCAGGGCAATCTTCAAGCGAGCCC
ACAGATCCCACCACACCAATGGTAACAGTGGAAACCCTAGAAAAGGGTTTTATGATAAACATATTCGCAGGGAAGAATCAGCCAGG
CATGCTTGTTTCGGTATTAGAAGCCTTTGAGGATATTGGGCTTAACGTTCTCGAAGCTAGGATTTCATGTACCGACTCCTTTAGCT
TGCATGCCAATGGAGTCGAGAATGAAGATGGAGATGGTATGGATTCTGAAGCAGTGAAACAAGCAGTGACAGATGCAATCAGAAGT
TGGAGTGAAAGCAATGATCTACAGAGCTAGATTGACCCACATTTTCTTTAATTCTCTTTATTATATTTTATTTATGCAAAATATAA
TAACACAATTTCTATAGTAATTTTACTTCTTAGTTTCTCTGTTCAACTTGTATCCCAGAATTTTCCCTTATAAAAGGGATAATGAA
GAAAAATCAATTGTATGTTACTACTATTTATTTCGCATAATTAAGCAATAGTAAGCACGTATTTAAAGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002879870 hypothetical protein ARALYDRAFT_483101 [Arabidopsis lyrata subsp. lyrata] | 697 | 3e-071 |
| NP_565932 uncharacterized protein [Arabidopsis thaliana] | 678 | 5e-069 |
| XP_002876355 hypothetical protein ARALYDRAFT_486063 [Arabidopsis lyrata subsp. lyrata] | 503 | 1e-048 |
| NP_191181 transcription regulator [Arabidopsis thaliana] | 495 | 9e-048 |
| XP_002520825 DNA binding protein, putative [Ricinus communis] | 433 | 1e-040 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8RUZ5 Putative uncharacterized protein | 678 | 4e-069 |
| Q9LYM0 At3g56220 | 495 | 6e-048 |
| B9S4A6 DNA binding protein, putative | 433 | 9e-041 |
| C6SYM6 Putative uncharacterized protein | 423 | 1e-039 |
| C6T4E8 Putative uncharacterized protein | 386 | 3e-035 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G40435.1 EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: transcription regulator (TAIR:AT3G56220.1); Has 165 Blast hits to 165 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 165; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 679 | 2e-071 |
| AT3G56220.1 transcription regulator | 495 | 3e-050 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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