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Information for unigene UN07503
| FASTA Sequence |
| Unigene ID: UN07503 | Length: 1344 |
| SNP | ATAACGAAACCAAAATACATATCTTTTCTAACTCCCAATGGAAAACGTTTTTTGAATGCAGTGCAGAGAAGGTGCAGCAAAATAAT
GAAGTTTGAGAAAGCAAGGCCATTCATGGCCATTGTTTTCATTCAGTTTTTGTATGCATTGATGTCTATAGTAGCGAAAACAGCTT
TGAACCAAGGGATGAGCCCTCATGTCTTAGTCGCTTACCGCATGGCTGTTGCTGCAACTCTCATTACTCCTTTTGCTCTCGTTCTT
GAGAGGAACTCAAGACCAAGGCTGACTTTCAAAATCTTATTACAAATATCCATCCTGAGTTTATTTGAGCCTGTGGTTGAACAAAA
CCTGTACTACTCAGGGATGAAACTTACTACTGCTACATTCACATCAGCTCTATGCAATGCACTTCCTGCAATGACATTTATAATGG
CTTGCATTTTCAAACTCGAGAAGGTGAATATCAAAAGGCGTCACAGCCAGGCAAAGCTGGTGGGAACCATGGTGGCTGTTGGAGGA
GCAATGCTCATGACATTTTACAAAGGGAATGTCATTGAGTTGCCTTGGACAAGTAAGCCAAGGGGGATTATTGGGCAGTCACATGC
TATGAATACTCCAAAGCAGGATGATATAGGAAAAGGATCAGTTATGCTTGTAGCGAGCTGCTTCAGTTGGTCATGTTACATCATTT
TACAGGCAAACATTCTGAATACATATCATGCTGAGCTCTCGCTAACAGCACTTATGTGCATTATGGGGATGCTGGAGGCTAGTGTT
ATAGCATTGATATGGGAAAGGAAGAACATGTCTGTCTGGAAAATCCACCTGGACATGAAGCTTTTAGCTTCAATATATGGGGGACT
TGTCTCAGGGTTAGCATACTATGCTATTGGATGGGCATCAAAGAAGAGAGGGCCTGTGTTTGTGAGCGCATTTAACCCTCTCAGCA
TGGTCATCGTTGCCATACTGAGTTCCTTTGTTTTCTTGGAAAAACTCTACCTAGGAAGGGCTGTTGGAGCAGTTGTCATCGTCTTT
GGAGTATATTTGGTACTATGGGGTAAAAGCAAGGACAAGATAGTAGAGCAGCATCCACCAAACGCTGGGTGTGCAGAGACTGTGGC
GAAAACTGACGAGCAGATGGTGCGGACGCCTGATAATAACCAAGTACTACCCATCCAAGACCAGTTAATGATCTCAAAGCCAACAA
CTCAGTCTCACTCAGTCTGACATGCTGATTCTGTTACATTCTCTCTTAATATAATGCACCACATTTTTGGTTAGTATTAACAGTAT
ATGGTTTGCCAGAAAAGAAAAGAAAAGAAAAGCAAGCAATGCTATCTGCATCTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_196871 nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana] | 1549 | 9e-170 |
| XP_002873622 nodulin MtN21 family protein [Arabidopsis lyrata subsp. lyrata] | 1533 | 7e-168 |
| AAO41946 unknown protein [Arabidopsis thaliana] | 1297 | 2e-140 |
| XP_002312070 predicted protein [Populus trichocarpa] | 1033 | 6e-110 |
| XP_002528467 Auxin-induced protein 5NG4, putative [Ricinus communis] | 956 | 5e-101 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FNA5 Nodulin-like protein | 1549 | 6e-170 |
| Q84WF1 Putative uncharacterized protein At5g13670 (Fragment) | 1297 | 1e-140 |
| B9HM56 Predicted protein | 1033 | 4e-110 |
| B9SR48 Auxin-induced protein 5NG4, putative | 956 | 4e-101 |
| B9HTM4 Predicted protein | 948 | 3e-100 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G13670.1 nodulin MtN21 family protein | 1549 | 3e-172 |
| AT2G39510.1 nodulin MtN21 family protein | 917 | 7e-099 |
| AT2G37460.1 nodulin MtN21 family protein | 831 | 6e-089 |
| AT5G07050.1 LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 family protein (TAIR:AT2G40900.1); Has 2288 Blast hits to 2270 proteins in 280 species: Archae - 23; Bacteria - 774; Metazoa - 5; Fungi - 0; Plants - 641; Viruses - 0; Other Eukaryotes - 845 (source: NCBI BLink). | 795 | 9e-085 |
| AT4G08290.1 nodulin MtN21 family protein | 741 | 2e-078 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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