 |
Information for unigene UN07511
| FASTA Sequence |
| Unigene ID: UN07511 | Length: 1449 |
| SNP | CCTCTCAACCTCCGCGAACAATGGCGGCTTCCCTTCAACCTGCATGCTTAGACCTCCACTTCGCCGGCAAGCATCCTCCGCCTCTC
AAACACACCAACAACCCCACCTTCCTCCGCTGCGTCTCCTCTCCGAATCTCCCCGAGCCTGACTCCTCGCCTGACACCAGTATCAC
CAGAGACCAGCGCAAAGTGGTGCGCATCGCGTGGGAGAAGATAGTCCGATGGTCACGCTCCTTACGCGCCAAAGCCAAAACCGATG
TCCTCGAACGCACTCGCAAGGTAGTTGTTCTTGGTGGAGGTTCGTTTGGTACAGCAATGGCTGCTCACGTAGCTGGAAGGAAAGAG
GGTTTAGAGGTCAACATGCTTGTGCGTGACTCTTTTGTCTGCGAATCTATCAACAAGAACCACCATAACTGTAAGTACTTTCCTGA
GCATAAGCTGCCTGAGAATGTGATCGCCACGACTGATGCCAAAGCTGCTTTGCTTGATGCTGACTACTGCCTACATGCTGTGCCTG
TTCAGTTCAGCTCGTTGTTTCTAGAGGGGATTTCGGATTACGTTGATCCAGGATTGCCTTTTATATCTCTTAGCAAAGGTCTGGAG
CTTAATACTCTTAGGATGATGTCTCAGATAATCCCTACTGCCCTGAAGAATCCTAGGCAACCTTTTGTTGCGCTTTCTGGCCCTTC
TTTTGCTCTGGAGCTGATGAACAATTTGCCTACTGCGATGGTGGTTGCCTCTAAAGATAAGAAATTGGCTAATTCCGTTCAGCAGC
TTCTGGCTTCTGGTTACTTGAGAATCAACACTTCCAGTGATGTCACAGGAGTGGAAATTGCTGGTGCTCTGAAGAATGTTCTAGCA
ATAGCTGCAGGAATTGTTGATGGGATGCAACTCGGTAACAACTCTATGGCGGCTCTGGTTTCACAAGGTTGTTCAGAGATAAGATG
GTTAGCCACAAAGATGGGTGCAAAGCCAACAACCATAACCGGCTTGTCAGGAACCGGGGACATAATGCTCACGTGCTTCGTCAATC
TTTCAAGAAACAGAACAGTTGGAGTCAGGTTAGGGTCAGGGGAGACATTAGATGAGATACTAAGCTCCATGAATCAGGTTGCAGAA
GGTGTAGCAACGGCTGGGGCAGTGATAGCATTAGCACAGAAATACAACGTGAAGCTCCCTGTTTTGACAGCCGTAGCTAAGATAAT
CGATAACGAACTGACACCAACTAAAGCTGTTCTTGAACTCATGAGCCTTCCTCAGGTTGAGGAAGTATGAGAGATAAAACAAATTG
GTTTTAAAGATCATACATATATTCAGAGGCGGCTAGATCTTTGCATTTGTGTTAGGAGATAGCTCATTACAGAGATGATTTGGAAG
TGAGTTTTGTAATCTCATTAATGTGAATTGTTCATAAACATTTTACAAAAATCTGTATAAAAGTTCTCTTTCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_565939 NAD-dependent glycerol-3-phosphate dehydrogenase-like protein [Arabidopsis thaliana] | 1916 | 3e-212 |
| XP_002879885 hypothetical protein ARALYDRAFT_483127 [Arabidopsis lyrata subsp. lyrata] | 1912 | 8e-212 |
| CBI25349 unnamed protein product [Vitis vinifera] | 1628 | 7e-179 |
| XP_002275322 PREDICTED: hypothetical protein [Vitis vinifera] | 1626 | 1e-178 |
| XP_002520875 glycerol-3-phosphate dehydrogenase, putative [Ricinus communis] | 1607 | 2e-176 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| C4XLT6 Glycerol-3-phosphate dehydrogenase [NAD(P)+] | 650 | 8e-067 |
| P61742 Glycerol-3-phosphate dehydrogenase [NAD(P)+] | 640 | 1e-065 |
| B0SAV3 Glycerol-3-phosphate dehydrogenase [NAD(P)+] | 638 | 2e-065 |
| B0SKD9 Glycerol-3-phosphate dehydrogenase [NAD(P)+] | 638 | 2e-065 |
| Q8EZB6 Glycerol-3-phosphate dehydrogenase [NAD(P)+] | 637 | 2e-065 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q949Q0 Putative glycerol-3-phosphate dehydrogenase | 1916 | 2e-212 |
| B9S4F6 Glycerol-3-phosphate dehydrogenase, putative | 1607 | 1e-176 |
| A5BDP3 Putative uncharacterized protein | 1606 | 2e-176 |
| B9I8E4 Predicted protein (Fragment) | 1576 | 5e-173 |
| C5XDG4 Putative uncharacterized protein Sb02g006800 | 1488 | 8e-163 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G40690.1 GLY1; glycerol-3-phosphate dehydrogenase (NAD+) | 1917 | 8e-215 |
| AT5G40610.1 glycerol-3-phosphate dehydrogenase (NAD+) / GPDH | 295 | 1e-026 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
