 |
Information for unigene UN07520
| FASTA Sequence |
| Unigene ID: UN07520 | Length: 782 |
| SNP | GGTGACAATGACGGCGAGATTAGGTACTGGAGCATCAACAATGGAACTTGCTCAAGAGTGTACAAGGGTGGTAGCACTCAGACGAG
GTTCCAACCACGTGTTGGAAAGTATCTCGCTGCTTCTTCAGCTAATGTTGCATCTGTACTAGATGTTGAAACACAAGCTTGTCGAC
ACTCTCTGCAGGGCCATACTAATCCGATAAACTCGGTGTGCTGGGACTCTTCTGGTGACTTCTTGGCAACGGTTAGTGAAGATAAG
GTGAAAGTTTGGACGTTCGGGTCAGGTAATGAAGGAGAATGTGTTCACGAGCTAAGCTGCAATGGCAGCAAGTTCCAGTCTTGTGT
TTTCCATCCTACTTACCCTTCTCTACTCGTAGTCGGTTGTTATCAGTCTTTAGAACTGTGGAACATGTCACAGAACAAGACGATGA
CTTTGACTGCTCACGATGGGATAATTGCGTCACTGGCTGTCTCAACTGCAACGGGATTGGTTGCATCGGCTAGTCACGACAAGCTT
GTGAAGCTGTGGAAGTGAGGGAAGAAAAGGACATGTTCGTTTATGTTTCTTAGGTGTTATTCTTCTTTTAAGGATAAACTTTGTAG
ACAGTTTTCATCTTCCATCTCAAGATAAGTCTTTCTCAAGATGTTTAAACAATGTTGCTGTTGTATGATCTGTGACCTAATTGGAA
ACTGTTGTAATCTTAGTTTTTTTAATAATGACGTTAAAGTTGTATGCCATTTGTTTAACCTTATGAAGGCAGAGGCTGTCGTATTC
ATTCAATC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| CAB43692 putative protein [Arabidopsis thaliana] | 841 | 5e-088 |
| NP_567896 transcriptional corepressor LEUNIG [Arabidopsis thaliana] | 841 | 5e-088 |
| AAG32022 LEUNIG [Arabidopsis thaliana] | 841 | 5e-088 |
| XP_002869264 hypothetical protein ARALYDRAFT_491464 [Arabidopsis lyrata subsp. lyrata] | 841 | 5e-088 |
| NP_001190891 transcriptional corepressor LEUNIG [Arabidopsis thaliana] | 841 | 5e-088 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FUY2 Transcriptional corepressor LEUNIG | 841 | 2e-089 |
| Q8YRI1 Uncharacterized WD repeat-containing protein alr3466 | 210 | 3e-016 |
| Q9BQ87 F-box-like/WD repeat-containing protein TBL1Y | 165 | 5e-011 |
| Q8I0F4 Lissencephaly-1 homolog | 155 | 8e-010 |
| Q9BZK7 F-box-like/WD repeat-containing protein TBL1XR1 | 123 | 4e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RPC6 WD-repeat protein, putative | 781 | 3e-081 |
| Q6H976 STYLOSA protein | 763 | 4e-079 |
| B9IKS4 Predicted protein | 752 | 7e-078 |
| B9H9Q7 Predicted protein | 713 | 2e-073 |
| B9RK14 WD-repeat protein, putative | 700 | 7e-072 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G32551.1 LUG (LEUNIG); protein binding / protein heterodimerization/ transcription repressor | 842 | 2e-090 |
| AT2G32700.3 WD-40 repeat family protein | 511 | 4e-052 |
| AT2G32700.5 WD-40 repeat family protein | 511 | 4e-052 |
| AT2G32700.4 WD-40 repeat family protein | 511 | 4e-052 |
| AT2G32700.1 WD-40 repeat family protein | 511 | 4e-052 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
