Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN07584

FASTA Sequence
Unigene ID: UN07584Length: 1463 SSR 
ACAAGCAAACTGTTTTATGAACTCTTTTCACATAACTTGGTAACTAGCGGTCAGCATAACATATGGTGATGATCTTAGAGGAATGC
GAGAGTTTACGGAATGCTAAAAATTGAGGTACACTCAGGTAGACTTAAACGGGTTTGTCCCACCGGATGAGGAAAGAGTTGGTGAC
AAGAAGATTGACTTAATGGTGCCTACGACGGTCTTTCGATGAGTGCGAGGTCTCACGATAGTCACGGTCCCGAGAAGAGTGATGCC
TCGATCTATCTGACGCTCCACCTGAGACGTTCATTCTATCACTTGACCGATGGTGACCTCGATCATTTGGTCTGTCTCTGTCCTTG
TCAGAATCTCTGCCTCTGTCTCTGTGAGAAGACCTAGCCATGTCCCTCTCTCTACCTCGTTCCTTCTCCCTATCACTCTCTCCTCT
TACTTTACTCCTATCCTCCCTCGAGTCTCTGACAATTGGTAGACTGTTTGACTCAGCATCGCTCTTCTTCGAATCCGTAGCCTTTT
CATGAGGCGTAGCAATCATTCCACCATCCTTAGACTCGTTATTAGTTGAACACTTGGTTTCAACAGCATCGCCAACTACCGGTAAA
GCATCCTTTGTAGTTGATTGAGCTTGAGCGTTCCCGGATCTACTGGAAAATGTAAACGACTTCCCATCCTTGCAAACTGAGATGTA
CTGAGCCTTTGGAAGACTGTATAGATGAGCAAGAACTCTGCACACTTGGTCAATACCAGATTTATCTGCATCAAATGCTTTCCACC
AGGGTGGACTCTCTGGGAGAGGTACTTGAAACCTGCGGGCAGCAGCATACACGACCCCACAAGCCACAACTTCACTTCTGAACCTT
ACACAAAGGTTTGTACGCAGACTATCATTAGCCAAGTTCCAAGCTTCTTGTCTCAGTTCAGGAGGTGTTTCAAGCGTGGCAAGGTA
ATTTGAAATGAACTTGTGAGGATGTTCAACATGACAAACGAAACCCATCTCTTTCAGTATATGTCTCTCCGTTCTGCTTATCTCAA
CTTTCAACTCAGAGTACTTCTTGGAGAACAAATCAAGATGATGTAAAGGCAAGTTTTCCCTGCGGCACTCCATCCTGTGGAACACA
ATGATGACCTGTCTTGCCTTTTTAGGGTTCTCTTCCAGTTTTGATGCAAGCCAGAGACAGCTCGCAGCTACAATCTTTACATCAAA
TTTGGCAAGAGACTTCTTACAATAGAACCTGTGGAAAAGAACCTGCCCAGTAGCCATAACTGCCTGTGGTAGCTTGAGCAATATTC
CACCTTCCTGGATGAGATCACATCCATAGATTCTTAGAGCCACTTCCGTCGCTTCATCTATTCCATCTTTCCTGGAAGGTGAAGTC
TTTATCTGCTCCTCTGTTAAGTAGAAGTTGTCGATCGCCGTGTAATTCGTCAATTCAGGTCTACAATGTACGGTGAGAGAGAGAGA
G

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002880790 ania-6a type cyclin [Arabidopsis lyrata subsp. lyrata]18008e-199
AAK49036 ania-6a type cyclin [Arabidopsis thaliana]17873e-197
NP_565622 cyclin-L1-1 [Arabidopsis thaliana]17838e-197
AAM13905 putative cyclin [Arabidopsis thaliana]17756e-196
NP_001077962 cyclin-L1-1 [Arabidopsis thaliana]15363e-168

Swiss-Prot top hits (Blast detail)Scoree value
Q8RWV3 Cyclin-L1-117833e-198
Q9AS36 Cyclin-L1-112369e-135
Q9UK58 Cyclin-L16051e-061
Q9R1Q2 Cyclin-L16051e-061
Q52KE7 Cyclin-L16042e-061

TrEMBL top hits (Blast detail)Scoree value
A8MR67 AT2G26430 protein15362e-168
C6TES1 Putative uncharacterized protein13732e-149
B9HLX9 Predicted protein13598e-148
B9SUP1 Cyclin-L2, putative13543e-147
B6TF83 Cyclin-L212818e-139

Arabidopsis top hits (Blast detail)Scoree value
AT2G26430.1 RCY1 (ARGININE-RICH CYCLIN 1); cyclin-dependent protein kinase regulator17842e-199
AT2G26430.2 RCY1 (ARGININE-RICH CYCLIN 1); cyclin-dependent protein kinase regulator15379e-171
AT2G26430.3 RCY1 (ARGININE-RICH CYCLIN 1); cyclin-dependent protein kinase regulator15379e-171
AT5G45190.1 cyclin family protein3568e-034
AT4G19600.1 CYCT1;4; cyclin-dependent protein kinase3371e-031

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
106  75%
 
182  25%

Unigene MembersMember information