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Information for unigene UN07588
| FASTA Sequence |
| Unigene ID: UN07588 | Length: 1488 |
SSR | | TTTATAAGAACACACAATCTTTTATAGAACAGTAAGACTTAAAATATGTTACATAAACTAGATGTTATTACAACAGTTTTCAGAAA
CATCCGTAAACACACACACACATTTTATAAAAAAAGCAGGACTTAAAATATGGTGCAGAAGCCACTAGACTAGAAGTTCTTACAAT
CTTTCAGAAACATACATAGACACACACACAAAGAGAGGAGATAGAGTTTGAACAAGTGGGTTTAGTTGCCAAAACCCATCATTGTT
CTTTACTAGTTTAAACTAGTTTCACACTGAGATAAAATGCAAGGCTCCGTTCACCTGACGATGAAGAAGCCTTAGGTATCGAATGA
GCCAAAGATGAGTTGCCAGTTCACAGTCAGATGGAACCAAGAACAAAAGAAAAACTCAAAATGTCTTTTATCAAGACAATAGAGTT
CTCCCTCTCTCGGTCTGCCTGTGAGCTACAATAAAAGTATCAGGTCTTGAAATTACAGCAGCCATTATCCATTGCTGCTGTTGCTG
TGATCCACTTGCTAGGCATTACCATGCCACCAGGGGGATGCAGTGAAGAGCCTAAAAAGTAGTTCATGCTTGTAACTTCTGATCCT
AGTCGGTTTGATAAGTTCATGGTCATGCTTTCAGGATGAAGAACATCTGAATCCTGAGAGTTACTTCGCTGTGGCTGAGGCTGAGG
CATAGTCTGCTTAGTTCCATCAGCTTTCTTTGCATTGTTCTGACTTTTAGTGTTCAAGAATCTCCCACCAGATCCTCTAGGACGGC
GCAATGCATGGAGATGGCGTGAATGATGCATATACGGCTTACGGAATTTGCTACTCGGTTTGTTCTGATCAAGAATAGCAGCAGCC
TTTGCACGTGATTGGCGTCGCCTGATGATTCCATGGTATTGCTTTGAGTTAACGTAGATAGTTCCATCTTCTGTTTCCATGTTTAG
AGGAAGCATTACACTGCTATGAGGTCCATAGGCTGAAAGAACTCCATAGTATTGTTGTTCCACACATGGATACTTTGTGTAGATCT
GTGGCTGAGAAAATCCAAGTTCCAAGTAAGGTGGTTGCATTGAGAAAGCAGATCCTTGAGGCTTTGGCACAACTCTTGAACTCTTT
ACTTCACCAAGTGAGAAAGCAAAGTGAGATGCAGAGTTGCTTTGTTTATTCACACCTTGTTCTATCCCACCAGCAGATCTGGCCTT
AACTCCGGCAAATGAATCAGAATCTCCAGAGAGACTCTCCGGAGTCAACGGCTGAGATCCAAAAGCGTTCCACCAAGAAATCTGTG
GAGCAGAGGGAAGACCTTCTCTCATAGTTTGCATAGCCATATCCAAGATCCAAAACAAAAGGCGAAGAAAATAAAAAAGGAAGTCA
AGATATTCGAGGTTGCCAAGATGAAAGAGTAGTTCGGACAGGAAGGAGTGAGAGAGAGATAGAGAGCTTCAGATTCCAATATATGA
ATTACAAGTGTAGATGGCAGCTCTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34077 unnamed protein product [Thellungiella halophila] | 1185 | 2e-127 |
| CAA74049 Transcription factor [Arabidopsis thaliana] | 1157 | 3e-124 |
| NP_187220 nuclear transcription factor Y subunit A-2 [Arabidopsis thaliana] | 1155 | 5e-124 |
| BAF00048 putative transcription factor [Arabidopsis thaliana] | 1151 | 1e-123 |
| XP_002884529 hypothetical protein ARALYDRAFT_477862 [Arabidopsis lyrata subsp. lyrata] | 1144 | 1e-122 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9M9X4 Nuclear transcription factor Y subunit A-2 | 1155 | 2e-125 |
| Q8LFU0 Nuclear transcription factor Y subunit A-10 | 748 | 3e-078 |
| Q8VY64 Nuclear transcription factor Y subunit A-4 | 255 | 5e-021 |
| Q945M9 Nuclear transcription factor Y subunit A-9 | 235 | 1e-018 |
| Q84JP1 Nuclear transcription factor Y subunit A-7 | 231 | 3e-018 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q147N1 At3g05690 | 1155 | 4e-124 |
| Q0WS51 Putative transcription factor | 1151 | 1e-123 |
| Q3E9K5 Putative uncharacterized protein At5g06510.3 | 576 | 5e-057 |
| B9IIJ3 Predicted protein | 392 | 1e-035 |
| B9H9L4 Predicted protein | 380 | 3e-034 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G05690.1 NF-YA2 (NUCLEAR FACTOR Y, SUBUNIT A2); transcription factor | 1156 | 1e-126 |
| AT5G06510.1 NF-YA10 (NUCLEAR FACTOR Y, SUBUNIT A10); transcription factor | 727 | 8e-077 |
| AT5G06510.2 NF-YA10 (NUCLEAR FACTOR Y, SUBUNIT A10); transcription factor | 727 | 8e-077 |
| AT5G06510.3 NF-YA10 (NUCLEAR FACTOR Y, SUBUNIT A10); transcription factor | 576 | 3e-059 |
| AT2G34720.1 NF-YA4 (NUCLEAR FACTOR Y, SUBUNIT A4); specific transcriptional repressor/ transcription factor | 241 | 2e-020 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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