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Information for unigene UN07618
| FASTA Sequence |
| Unigene ID: UN07618 | Length: 1090 |
SSR | | AAGCAGCAAAACCCTAAATTAAAACAACAAAATCAAAAAAGATTAAAAAACCAGATCTTCACGCTCTTCTCCTGCATCAACAACCT
CGAGATTCTCCTCCGCAAATCCACCCTCAGAAGAGAATGGATCAACAAGAGCATGCACAGTCCGGAGCCATGAACTACGGCTCAAA
CCCATACCAAACCAACCCCATGACAACCACAGTAGCCGGCAGCGCGGGCCCCACAGCACCTCCCGGGCAGCTAGGGTTCCACCAGA
TCCACCAGCAGCAGCAGCAGCAACAGCTGGCTCAGCAGCTCCAGGTCTTCTGGGAGAACCAGTTCAAGGAGATTGAGAAGACAACC
GATTTCAAGAACCACAGCCTTCCCCTCGCCAGGATCAAGAAGATCATGAAGGCCGACGAGGACGTGCGTATGATCTCCGCCGAGGC
GCCCGTCGTGTTCGCGAGGGCATGCGAGATGTTCATCCTGGAGCTGACGCTCAGGTCGTGGAACCACACTGAGGAGAACAAGAGGA
GGACGCTGCAGAAGAACGATATCGTGGCTGCGGTGACTAGGACCGATATCTTTGATTTCCTTGTGGACATTGTTCCGAGGGAGGAT
CTGAGGGATGAGGTCTTGGGGAGTATTCCGAGAGGGACTGTTCCCGAGGCTGCTGCTGCTGGATATCCGTATGGATACTTGCCTGC
TGGAACTGCTCCGATAGGGAACCCGGGGATGGTTATGGGTAACCCCGGTGGTGCATACCCACCTAACCCTTACATGGGTCAACCAA
TGTGGCAGCAACAGGGACCTGATCAAACTGACCAGGAGAATTAAACTTTGGCAAAGAAACTAGCTCTGGAATTAAGAAAGGAGGGG
AGACTTTTAGAGAAGAAAATGAAAGGAACATATCAGAAGAATTTCAAATCAGTGTGGTAGAAGAAGAATCTAAGTCTTTGTTTTAT
GTCTGTCTATTCAATCCTTTCTTTAAGGAAAAAAATTAGGGATGAACGAGAAGAAGACTGTATAAAACTATAACTCTGTAAGGGAA
CAAGTGTGTGGTTTGACAAGGTTTTTTATTTCTATGTTATTGTCTCTTTTATCTTTGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_172371 nuclear transcription factor Y subunit C-9 [Arabidopsis thaliana] | 1152 | 7e-124 |
| BAJ33993 unnamed protein product [Thellungiella halophila] | 1152 | 7e-124 |
| XP_002889726 hypothetical protein ARALYDRAFT_470975 [Arabidopsis lyrata subsp. lyrata] | 1147 | 3e-123 |
| AAF06791 heme activated protein [Arabidopsis thaliana] | 1146 | 4e-123 |
| AAB70410 Similar to Schizosaccharomyces CCAAT-binding factor (gb|U88525). EST gb|T04310 comes from this gene [Arabidopsis thaliana] | 1034 | 4e-110 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8L4B2 Nuclear transcription factor Y subunit C-9 | 1152 | 3e-125 |
| Q9ZVL3 Nuclear transcription factor Y subunit C-3 | 916 | 7e-098 |
| Q8LCG7 Nuclear transcription factor Y subunit C-2 | 543 | 1e-054 |
| Q9SMP0 Nuclear transcription factor Y subunit C-1 | 540 | 3e-054 |
| Q9FMV5 Nuclear transcription factor Y subunit C-4 | 532 | 2e-053 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DFS3 AT1G08970 protein | 1152 | 5e-124 |
| Q2HTM1 Histone-fold/TFIID-TAF/NF-Y | 731 | 3e-075 |
| B7FI76 Putative uncharacterized protein | 728 | 7e-075 |
| B9I7X7 Predicted protein | 724 | 2e-074 |
| Q38HS7 Putative uncharacterized protein | 715 | 2e-073 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G08970.4 NF-YC9 (NUCLEAR FACTOR Y, SUBUNIT C9); DNA binding / transcription factor | 1153 | 2e-126 |
| AT1G08970.1 NF-YC9 (NUCLEAR FACTOR Y, SUBUNIT C9); DNA binding / transcription factor | 1153 | 2e-126 |
| AT1G08970.3 NF-YC9 (NUCLEAR FACTOR Y, SUBUNIT C9); DNA binding / transcription factor | 1153 | 2e-126 |
| AT1G08970.2 NF-YC9 (NUCLEAR FACTOR Y, SUBUNIT C9); DNA binding / transcription factor | 1153 | 2e-126 |
| AT1G54830.2 NF-YC3 (NUCLEAR FACTOR Y, SUBUNIT C3); DNA binding / transcription factor | 943 | 5e-102 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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